Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3112 ATGGATGGGAAGTCTAACCTTCCGATCAAGCCAGATCCTTCTTCCCCGAACTTCGTCCGCAACTTTCAGGCCGCCTTGAAGCGCCACCGTCCTCTCGCTACAGGACAATCCAATATCATTAGGCCAAGACGCACTCTTCTTGTTCGACCAAATGATTCACTCACACGCCGAAACACCGATTCTGAAGCTAGCACTGTTGTTAACCCTTCTCAAGATGCAAATGTTCACACCAAAGTTCCTCAAGAAATGGAATATGTTGAAGGCAACCAACATGAAGCTTCAATTGATGATTCAAAGCAAGCTAAAATTCAGAAGGCTGAGCCCGATGGAGGAGTAAGTTGCTCCATGTTGCCGAGGAGAGGTCCAGTTACACGGGATAATTTGCACCAGTTCAGAAACTTTCTTAGTAAGCCAGCAACACAGTCTTCGGTGGTTGGATCTTCGTGTGCCACAACTACCTCAGTCAATTCAACTTCAGCTCCTATGATGAATTCAACGACCCGTTTGCATTTAGACAATGGCCTTAGCGTAGCTGCTGATCCTTTAGGGAAAGCTGAAAGAGTTACGGAATCAGCAAATATAAACACTTGTGTCGAAAAAGCGAATAAATTATCAGTTGATAAGGCTGCAACTGTGGTGCAAACATTTGATTCTTCTGTCGACTCTGAGTTGGCATTTAAAGGGAGTGACCGATCTAAGGAGCAACCAGAATGCATGTTAAAAGAAACTAACAATTCAAAATATGCTTCTTCTGACGGTGACAAGTTGATCAAAGGGAAAGAGCCTGCAGATGATGCCAGCTTACAGCCTCGGGCTCTGGTGCCCAAAACATCAACTTTGGACGTGAAGTCTGAATGTTCTAAGTTAGAAAAACGAGAGAAGGACGCAAGTAGTAAAAGTTCCTCAGTCGCTAAGAAAAGGACTTATGACCCAGATTTATTTTTCAAGGTCAATGGCAAGCTTTATCAGCGTCTTGGCAAGATAGGAAGTGGCGGAAGTAGTGAGGTGCACAAGGTGATTTCATCAGACTGTAATATATTTGCACTTAAGAAGATCAAACTCAGGGGTCGTGATTACGCTACTGCATACGGATTTTGTCAAGAGATTGAGTATCTTAATAGGCTGAAAGGAAAGGACAATATTATACAGCTTATAGATTATGAGGTGACTGACAAGGCTTTGCTCGAAGAAGTTATGAAAGGCTCTCTTTGTAATAAGGATGGCCGGGTCAAAGATGATGGATATATATACATGGTTCTTGAATACGGTGAAATTGATTTAGCTCACATGTTGTCACAGCAGTGGAAGAAGCTGGGTGAATCAAACGAGATGATAGATGAAAACTGGCTTCGGTTTTATTGGCAGCAAATTCTTCAAGCTGTCAATACAATTCACGAGGAACGTATTGTGCACTCTGACTTGAAGCCTGCTAACTTCCTCCTGGTCAAGGGTTCCCTAAAACTAATTGATTTTGGTATCGCCAAAGCAATAATGAGCGATACTACTAATATTCAACGGGAATCACAGGTGGGTACTCTGAGTTACATGTCTCCAGAAGCATTTTTGTGTAATGAGACTGATGCGAACGGAAACATCATCAAGTGTGGTCGGCCATCAGATATCTGGTCTTTGGGGTGCATCCTTTATCAAATGGTATATGGGAGAACCCCTTTTTCAGAATACAAGACATTTTGGGCCAAATTTAAAGTTATTACCGATCCCAAGCATAAAATCACCTATGAACCACTTTCAAATCCATGGTTAGTGGATCTTATGAAGAGGTGTCTAGCATGGGATCGCAATCAAAGGTGGAGAATTCCTCAGTTACTCCAACATCCTTTTCTTGCACCTCATGTACTACCTCATCCATCTTTGTCAGAAGACCATAGCTGTAAATTTGTACAACTTGTTGCTGAACCTTGCGCTTATGACCCTGAAGCATCCCAACTTTGTCATCAACTCCAATGTCTACTGGTTGACCCACTTGAGACAGCGAATCAGTCACTAAACTCAAGAGATCAACAAATAACACTGTTGTCCCAACTGTCTGAACTCTGTATTCAACTACGGGAACGTTTGATGGGTACTGATATGAGTAACTGA 2103 0.4251 MDGKSNLPIKPDPSSPNFVRNFQAALKRHRPLATGQSNIIRPRRTLLVRPNDSLTRRNTDSEASTVVNPSQDANVHTKVPQEMEYVEGNQHEASIDDSKQAKIQKAEPDGGVSCSMLPRRGPVTRDNLHQFRNFLSKPATQSSVVGSSCATTTSVNSTSAPMMNSTTRLHLDNGLSVAADPLGKAERVTESANINTCVEKANKLSVDKAATVVQTFDSSVDSELAFKGSDRSKEQPECMLKETNNSKYASSDGDKLIKGKEPADDASLQPRALVPKTSTLDVKSECSKLEKREKDASSKSSSVAKKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCNIFALKKIKLRGRDYATAYGFCQEIEYLNRLKGKDNIIQLIDYEVTDKALLEEVMKGSLCNKDGRVKDDGYIYMVLEYGEIDLAHMLSQQWKKLGESNEMIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRESQVGTLSYMSPEAFLCNETDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPKHKITYEPLSNPWLVDLMKRCLAWDRNQRWRIPQLLQHPFLAPHVLPHPSLSEDHSCKFVQLVAEPCAYDPEASQLCHQLQCLLVDPLETANQSLNSRDQQITLLSQLSELCIQLRERLMGTDMSN* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3112 700 ProSiteProfiles Protein kinase domain profile. 322 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g3112 700 PANTHER MIXED LINEAGE PROTEIN KINASE 33 671 - -
Psa5g3112 700 SUPERFAMILY Protein kinase-like (PK-like) 316 626 IPR011009 -
Psa5g3112 700 Gene3D Phosphorylase Kinase; domain 1 315 402 - -
Psa5g3112 700 SMART serkin_6 322 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g3112 700 PANTHER DUAL SPECIFICITY PROTEIN KINASE TTK 33 671 IPR027084 GO:0004712|GO:0007093|GO:0051304
Psa5g3112 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Psa5g3112 700 MobiDBLite consensus disorder prediction 224 254 - -
Psa5g3112 700 CDD PKc_Mps1 320 615 - -
Psa5g3112 700 Pfam Protein kinase domain 322 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g3112 700 MobiDBLite consensus disorder prediction 224 240 - -
Psa5g3112 700 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Psa5g3112 700 Gene3D Transferase(Phosphotransferase) domain 1 435 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3112 Psa-Chr5 241133804 241138226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3112 328 615 MAP Kinase Kinase Kinase AT4G08470 28.767 1.25e-24 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Psa5g3112 Pkinase 4.3e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3112 K08866 - gmx:100788990 906.36