Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3100 ATGTATGGTAATACCATTTTGTACTATCGTAGGCCAGTAATTGATCAAGGATTCACGTTCTTAGGAATGCAATATACATCAGCCTCATTTACATCTATTTTGATGAATACTGTGCCTTCTATTACCTTTTTCTTAGCCGTTATTTTCAGGATTGAACGTGTGAATATTAAGCAGATAAGAAGCATAGCAAAGGTGATTGGGACAATAGTAACATTTGGAGGAGCATTATTAATGACTATTTACAAAGGACCACCAATCCACCTTTTTTACTCTCCAAAAATAGCTCATCATGACGCTGGAAGTCACGACACTCAAACTCTTAAACATTGGGTCTCAGGAACACTCTTTATATTATTGGGTTGTTTCACTTGGTCATCTTTCTTCATATTACAGTCGATAACGTTGAAAAAGTATCCGGCTGAAATGTCATTGTCTACGTTAATTTGCTTAGTTGGTTCTTTGATGAGCACCGCGGTGGCGCTGGTGGCGGAGCGTCACTCTGGTGCGGGGGTTTGGGCTCTTGGTTGGGACTTTAGACTCTATGGTCCTCTCTATACGGGAATAGTTACGTCAGGAATAACATATTATGTGCAAGGTTTGGTATTGCAAAGCAGAGGCCCAGTATTTTTCACTGCATTTAATCCTCTTTGTATGATCATCACTTGTGCTTTAGGCTCCTTTCTTTTGGCAGAACAACTCCACTTGGGCAGTATCATTGGAGCAGTGATTATTGCAATGGGTCTTTATTGTGTTGTGTGGGGTAAAGCCAAAGACTATGCATCAGCCACTACTACTATGCCACCATCGTCAATTACAATGAAGCAAATTGAGACACAACTTCCAATTACTTCATCTGATCATGTCTAA 867 0.4002 MYGNTILYYRRPVIDQGFTFLGMQYTSASFTSILMNTVPSITFFLAVIFRIERVNIKQIRSIAKVIGTIVTFGGALLMTIYKGPPIHLFYSPKIAHHDAGSHDTQTLKHWVSGTLFILLGCFTWSSFFILQSITLKKYPAEMSLSTLICLVGSLMSTAVALVAERHSGAGVWALGWDFRLYGPLYTGIVTSGITYYVQGLVLQSRGPVFFTAFNPLCMIITCALGSFLLAEQLHLGSIIGAVIIAMGLYCVVWGKAKDYASATTTMPPSSITMKQIETQLPITSSDHV* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3100 288 PANTHER WAT1-RELATED PROTEIN 7 280 - -
Psa5g3100 288 Pfam EamA-like transporter family 112 252 IPR000620 GO:0016020|GO:0016021
Psa5g3100 288 Pfam EamA-like transporter family 15 78 IPR000620 GO:0016020|GO:0016021
Psa5g3100 288 SUPERFAMILY Multidrug resistance efflux transporter EmrE 172 256 - -
Psa5g3100 288 PANTHER WAT1-RELATED PROTEIN 7 280 IPR030184 GO:0016021|GO:0022857
Psa5g3100 288 SUPERFAMILY Multidrug resistance efflux transporter EmrE 15 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3100 Psa-Chr5 239339614 239341657 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3100 7 286 Nodulin-like Gene Family AT4G08300 47.872 1.20e-88 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3100 - - gmx:100812537 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3100 5 239339614 239341657 Psa5g3100 5 239339614 239341657 ECH