Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3097 ATGTCTTCAGCATCAATGTACAAAATCACTTCCATAATCACAAGCAACATCACTTGCTCACACTCAAGAAGCTTACTAAGAAATAGATTCACAAAAATGGGTGCATGGTTAAGAAATGCAAAGCCATATCTATTACTCTTGGCTGTTCAGTTTGGTTCTGCAGGAATGTTCATTTTCGCCATGGATGCTATCAAGAAAGGAATGAGCCATTACGTCTTCATCGTCTACCGTAACGCTATCGCCACTGTAACATTAGTTCCGTTCGCATTTTATATAGAAAGGAAAATTAGGCCGAAGATGAGTCTCCGGGTATTTTCAGAGATTATGCTACTGGCTTTCTTCGAAATAATACTTGATCAATGTTTTGCGCTGTTGGGGATGAAATTAACGTCGGCTTCTTTCCTTTCTGCTGTGATGAACTCTGCGCCGTCCATTACTTTTCTGTTCGCAGTCATTTTAAAATTGGAGCACATGAAGATAAAGGAGATAGCATGTCAAGCTAAAATGCTCGGTACTGCAATAACATTTGCAGGAACATTGCTAATGGCTCTATACAAAGGTCCTGTAGTTAATATTGTGAAGTCATCTTTTAGTCATGCTACCAGTCAGGCTGAGACTGTGAACGATTCCGGTAATAACCGGTGGATCATAGGAACATGTTTCCTCCTCATCGGCTGCGCTGGCTTTTCCGCCTTTTACATATTGCAGGCTATCACGTTGAGAAAGTACCCGGCACCGATGTCGTTGGCAACCTGGGTTTGTTTCGTTGGCGCACTTCAAAGCTTTGTGGTGACAATTATCGCTGAGCGTCACAACTCTCATGCTTGGGCTCTTGGTTGGGATTCACGACTTTTTGCCCCGGCATATGCGGGTATAGTTACATCAGGAGTGCAGTATTACATACAAGGGGTTGTTATGAAAGCTATGGGCCCAGTTATTGTAACTGCTTTTAATCCGTTGCGTATGATCATTGTAACGGCCTTGGCGTGCATCATTCTTTCAGAGAAGCTCTTTCTTGGAAGTATAATTGGAGCAGTAGTGGTGGTTCTTGGGCTTTATCTAGTTGTGTGGGGAAAATCAAAAGAGCAGAAAGTCCCGAATGATATTCATATGACAGAGTCACCTATGAAGGAGAAACCATTACAAGAGCAACATGGGTTACCTGTGACAGCTCCTAAAAGTGAAAGTAGAGATAGTAATAAAGCTCAATTGGTCATGCACGGTGAAGAAACATGTTACAATTGTGGACGAAATTGA 1257 0.4216 MSSASMYKITSIITSNITCSHSRSLLRNRFTKMGAWLRNAKPYLLLLAVQFGSAGMFIFAMDAIKKGMSHYVFIVYRNAIATVTLVPFAFYIERKIRPKMSLRVFSEIMLLAFFEIILDQCFALLGMKLTSASFLSAVMNSAPSITFLFAVILKLEHMKIKEIACQAKMLGTAITFAGTLLMALYKGPVVNIVKSSFSHATSQAETVNDSGNNRWIIGTCFLLIGCAGFSAFYILQAITLRKYPAPMSLATWVCFVGALQSFVVTIIAERHNSHAWALGWDSRLFAPAYAGIVTSGVQYYIQGVVMKAMGPVIVTAFNPLRMIIVTALACIILSEKLFLGSIIGAVVVVLGLYLVVWGKSKEQKVPNDIHMTESPMKEKPLQEQHGLPVTAPKSESRDSNKAQLVMHGEETCYNCGRN* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3097 418 PANTHER WAT1-RELATED PROTEIN 39 391 IPR030184 GO:0016021|GO:0022857
Psa5g3097 418 PANTHER WAT1-RELATED PROTEIN 39 391 - -
Psa5g3097 418 SUPERFAMILY Multidrug resistance efflux transporter EmrE 76 186 - -
Psa5g3097 418 Pfam EamA-like transporter family 41 182 IPR000620 GO:0016020|GO:0016021
Psa5g3097 418 Pfam EamA-like transporter family 217 356 IPR000620 GO:0016020|GO:0016021
Psa5g3097 418 MobiDBLite consensus disorder prediction 373 400 - -
Psa5g3097 418 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3097 Psa-Chr5 239064211 239066734 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3097 37 410 Nodulin-like Gene Family AT2G37460 40.909 1.87e-103 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3097 - - gmx:100820569 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3097 5 239064211 239066734 Psa5g3097 5 239064211 239066734 ECH