Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3095 ATGGAGGACCAAAATGCTGTTGATAAGGTTAACAATGGTTCACTACTTCGTAAGATGAAACCTTACCTTGCTATATTGTCTCTTCAATTTGGTTACTCTGGGATGTATATCATTACTATGGTTTCTTTTAAACATGGTATGAGTCATTGGATTCTCTCTGTGTATCGTCATATCGTGGCCGCAATTATAATCATCCCTTTCGCGCTCGTTCTCGATAGGAAAATAAGGCCAAAGATGACTCTTCCTATATTCTTGAGGATAGTGGCACTTGGTTTCCTTGAGCCAGTACTAGATCAAAACTTGTTCAACATAGGAATGAAGATGACTTCGACAACGTTTTCATCTGCCACTGTTAATGTCCTTCCAGCTCTAACTTTTATAATGGCACTCATTTTCAGGTTAGAGTCAGTAAATTGGAGAAAATTTCATAGCGTAGCCAAAGTAATTGGAACGGTTATAACCGTTTCAGGAGCTATGGTTATGACTTTGTATAAAGGACCTGCCTTTCAGATCATAAAAGGAGGAGGAATCAGCCACCACAGCGACACCGCCGCCGACGAATCGATTGAACAAAATTGGGTGATGGGTCCAATAATGCTCATTGCAAGTTGTGCTAGTTGGGCTGGATTCTTTATTTTGCAATCATTTACATTGAAGAAATACCCAGCAGAGCTATCACTCACAGCATGGATTTGTGTAATGGGAATTATTGAGGGTTCAATTGCATCACTTATATTTGAAAGAGACATGAGTGTGTGGGTCATAGGTTGGGATTCAAGGCTTGTTGCATGTGTTTATTCTGGTGTGATATGCTCTGGAATGGCATATTATGTACAAGGAGTTGTAACCAGAGAACGTGGACCAGTTTTTGTTACTTCTTTCAGTCCATTATGCATGATTATCACTGCTGCATTGGGTTCACTTGTCTTAGCAGAACTAGTTCATCTTGGAAGTGTATTTGGAGCTATACTCATTGTTGCTGGACTTTACACTGTGGTGTGGGGGAAAAGCAAAGATCGTCGTGAAAGCGCAAAAGAAATCCAAGAATTACCAATTAAGGATGGTACAAAATCAGAGACAGACATTTTTGATGGGATTGAGATTAATGGTGCAGATGAAAAGTTGAAAAAAGGAGCAGCAAAAAATGTTCCAACATAA 1158 0.3955 MEDQNAVDKVNNGSLLRKMKPYLAILSLQFGYSGMYIITMVSFKHGMSHWILSVYRHIVAAIIIIPFALVLDRKIRPKMTLPIFLRIVALGFLEPVLDQNLFNIGMKMTSTTFSSATVNVLPALTFIMALIFRLESVNWRKFHSVAKVIGTVITVSGAMVMTLYKGPAFQIIKGGGISHHSDTAADESIEQNWVMGPIMLIASCASWAGFFILQSFTLKKYPAELSLTAWICVMGIIEGSIASLIFERDMSVWVIGWDSRLVACVYSGVICSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAELVHLGSVFGAILIVAGLYTVVWGKSKDRRESAKEIQELPIKDGTKSETDIFDGIEINGADEKLKKGAAKNVPT* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3095 385 PANTHER WAT1-RELATED PROTEIN 15 355 IPR030184 GO:0016021|GO:0022857
Psa5g3095 385 PANTHER WAT1-RELATED PROTEIN 15 355 - -
Psa5g3095 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 338 - -
Psa5g3095 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 155 - -
Psa5g3095 385 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020|GO:0016021
Psa5g3095 385 Pfam EamA-like transporter family 26 154 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3095 Psa-Chr5 238919316 238923093 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3095 12 382 Nodulin-like Gene Family AT4G08300 62.766 4.76e-170 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3095 - - gmx:100783910 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3095 5 238919316 238923093 Psa5g3095 5 238919316 238923093 ECH