Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3091 ATGGATTGTTGTGTGTGCACAACTATGCCGTTAATATTAAGGCCTCCAAGGAATACAATATGTGGATCCTGCTATGAAGGAGTTAGAAGCATAATCAACATGATGAACGATCTTGAAAGTGACAAAACAAAAGCAATCACTACTCCAACTGATTCTCCGGTTTCGCGGCGAAATTCGAGTAAGACACTTGATGATTGCATAAAATTGTGTTCAGAACAAATAGAGAAGTTTAATCAACAAAAACAAGATTTGGGTTTTCTCAGAGGCTTTCTTGCTGCATTCAAAGAACAAATTCATACAGATATATTGATTTGTCCAGGCAATCATGGTCCACCGATTCCTGCGCATAAATCCGTTTTGGCTGCAAGATCAGAAATTTTCAAGAACATGCTAGAGAGTGATGAATGTAAAGCTGCACCAAGTTGTAACACAATAACTATACCAGATTTGAAGCATGAAGAACTAGAATCTCTGTTAGAGTTTCTGTACAGTGGAACATTGGCTTTGGAAAAATTGGAGAAACATGTGTATGCTTTGTCACAAGCAGCTGATAAGTATATTATTCCACACTTGTTGAAATACTGTGAAAGATTCTTGCTTAACTCAATAAGCAGTTCTAATGCATTTGAGACACTAGAGATTGCTGATACTTGTTCAAACCAAAATTTGAAGGAGACAGCTTTTAATTTCTTAGTTAAGAATATTGAGTTTATGGTTTCTTCTCCTAAGTTTGAAGGTTTTGTGCATAGGTGTCCACATTTAACTGTGCAGCTAGTTACAAGGGCATTTGTGAATGGTTCCAAATAA 807 0.3643 MDCCVCTTMPLILRPPRNTICGSCYEGVRSIINMMNDLESDKTKAITTPTDSPVSRRNSSKTLDDCIKLCSEQIEKFNQQKQDLGFLRGFLAAFKEQIHTDILICPGNHGPPIPAHKSVLAARSEIFKNMLESDECKAAPSCNTITIPDLKHEELESLLEFLYSGTLALEKLEKHVYALSQAADKYIIPHLLKYCERFLLNSISSSNAFETLEIADTCSNQNLKETAFNFLVKNIEFMVSSPKFEGFVHRCPHLTVQLVTRAFVNGSK* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3091 268 Pfam BTB/POZ domain 94 202 IPR000210 GO:0005515
Psa5g3091 268 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED 1 267 - -
Psa5g3091 268 Gene3D Potassium Channel Kv1.1; Chain A 67 204 IPR011333 -
Psa5g3091 268 SMART BTB_4 100 203 IPR000210 GO:0005515
Psa5g3091 268 CDD BACK 204 244 - -
Psa5g3091 268 ProSiteProfiles BTB domain profile. 100 171 IPR000210 GO:0005515
Psa5g3091 268 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 1 267 IPR044784 -
Psa5g3091 268 SUPERFAMILY POZ domain 85 203 IPR011333 -
Psa5g3091 268 Gene3D - 205 267 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Psa5g3091 BTB 5.8e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3091 K10523 - gmx:100777561 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3091 5 238432453 238434460 Psa5g3091 5 238432453 238434460 ECH