Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3070 ATGACACCGTCTGCCGGAGTCCATGTCCCCCTCTTGACTGGATCCACACCGGCAGCGGGCCGCGGTTCAATTCCCGGCGCCGTATTCAATGTTGCCACGAGCATAATTGGCGCTGGGATCATGTCAATCCCGGCGATTCTTAAAGTTCTCGGTGTTTTCCCCTCTTTCGCCTTAATTGCAATCGTGGCTGGGCTAGCCGAAGTGTCGGTGGATTTTCTCATGCGTTTTACACATGCCGGTGATACGACGACGTACTCTGGCGTCATGAAGGAAGCTTTCGGGTCCGCTGGAGCATTAGCCGCTCAAGTTTGCGTGATAGTCACCAACTTTGGTGGTTTAATTCTCTTCCTTATTATTATCGGGGATGTTTTATCTGGGAAGAGAAGTGGAGATGAAGTGCACTTGGGAATTTTGCAACAGTGGTTTGGGATTCACTGGTGGAATTCCAGAGAAGTCGCTCTTCTCGTAACCTTGGTTCTTGTTATGCTTCCATTGGTCTTGTACAGAAATGTAGAATCCTTGAAGTACAGTTCTGCAGTATCAACTCTTCTTGCTGTGTCATTTGTTGCCATTTGTTCTGGTTTGGCTATTGTTGCTTTGGTGCAAGGAAAAACACAAACTCCTAAATTGGTTCCTCGGATAGACTACCAGACATCTTTCTTTGATTTGTTCACTACAGTTCCTGTTGTAGTCACAGCATTCACATTTCATTTTAATGTGCATCCAATTGGATTTGAGTTTGCAAAGCCATCTGATATGAAAACAGCAGTTCGATTAGCAATAATGTTTTGTGCTGTTATCTACTTTACAATTGGTTTATTCGGCTACCTCTTATTTGGAGATTCAACACAATCAGACATTCTAGTCAATTTTGATCAGAGTGCTGATTCTGTTGGTTCGTTGTTCAATAGTTTAATTCGTGTAAGCTATGCACTCCACGTTATGCTGGTATTCCCTATAGTGAACTTCTCTTTAAGAGCCAACATTGATGAAGTATTCTTCCCCAAGAAGGCTGTACTAGCCACAGACAACAAGAGATTTGTGATTCTCACTCTTGTGCTCTTAGTATTCTCCTATCTTGCTGCTATAGCAATACCAGATATTTGGTACTTTTTTCAGTTTCTAGGATCAACAACTGCACTGTGTCTTGCCTTTATTTTCCCAGGCATTATAGTTTTAAGGGATGCTCTTGGAATATCAACAAGAAAGGACAAAATAATAGCACTGGTTATGATTATATTAGCTGTAGTAGCAAGTGCAATTGCAATTTCCACCAACATATACAATGCCTTAAGTAGCAAGTCATAG 1308 0.422 MTPSAGVHVPLLTGSTPAAGRGSIPGAVFNVATSIIGAGIMSIPAILKVLGVFPSFALIAIVAGLAEVSVDFLMRFTHAGDTTTYSGVMKEAFGSAGALAAQVCVIVTNFGGLILFLIIIGDVLSGKRSGDEVHLGILQQWFGIHWWNSREVALLVTLVLVMLPLVLYRNVESLKYSSAVSTLLAVSFVAICSGLAIVALVQGKTQTPKLVPRIDYQTSFFDLFTTVPVVVTAFTFHFNVHPIGFEFAKPSDMKTAVRLAIMFCAVIYFTIGLFGYLLFGDSTQSDILVNFDQSADSVGSLFNSLIRVSYALHVMLVFPIVNFSLRANIDEVFFPKKAVLATDNKRFVILTLVLLVFSYLAAIAIPDIWYFFQFLGSTTALCLAFIFPGIIVLRDALGISTRKDKIIALVMIILAVVASAIAISTNIYNALSSKS* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3070 435 PANTHER AMINO ACID TRANSPORTER 3 433 - -
Psa5g3070 435 Pfam Transmembrane amino acid transporter protein 21 423 IPR013057 -
Psa5g3070 435 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3070 Psa-Chr5 237215127 237217793 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3070 1 429 Amino Acid or Auxin Permease AAAP Family AT3G56200 57.737 1.54e-171 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3070 - - gmx:100815694 661.373