Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3069 ATGTCACCACCATCAAACGGAGTCCATGCTCCCCTCTTGACTGGCTGTAACTCAGCGGCTGGGTCTGGTTCGATTCCTGGTGCCGTACTCAATGTCGCTTCCAGCATAATTGGCTCTGGAATCATGTCAATCCCGGCGGTTCTTAATGTTCTCGGCGTGTTTCCCTCTTTCACCTTATTTCTAATCGTCGCCGTGCTTGCCGAAGTCTCCGTCGAGTTTCTCATGCGTTTTACACATGCCGGTGAAACGACGACGTACTCCGGCGTCATGAAGGAAGCTTTCGGTTCCGCTGGAGCTTTAACCGCTAAAGTTTGTATCATAATCAATAACTTTGGGGCCTTAATTCTCTTCCTCATTATTATTGGGGATGTTTTATCTGGAAAGAAAAGTGGAGATGAAGTGCACTTGGGAATTTTGCAACAGTGGTTTGGGATTCAATGGTGGAATTCCAGGGAAGTTGCTCTTCTCGTCACATTGGTTCTTGTTATGTTTCCATTGGTCTTGTACAGAAGTGTAGAATCCTTGAAGTACAGTTCTGCAGTATCAACTCTTCTTGCTGTGGCATTTGTTGTCATTTGTTCTGGACTGGCTATTGTTGCTTTGGTGCAAGGAAAAACACAAACTCCTAAACTGGTTCCTCGATTAGACTACCGGACATCTTTCTTTGATTTGTTCACTGCAGTTCCTGTTATAGTCATAGCATTCGCATTTCATTTCAATGTACATCCTATTGGATTTGAGCTCGCAAATCCATCTGATATGAAAACAGCAGTTCGATTAGCAATATTGTTTTGTGTTGTTATCTACTTTATAATTGGTTTATTTGGCTACCTCTTATTTGGAGATTCAATACAATCAGACATTCTAGTCAATTTTGATCAGAGTGCTGATTCTGCTGTTGGTTCATTCTTGAATACTTTAATTCGTGTAAGCTATGCACTCCACATTATGCTAGTATTCCCTGTAGTGAATTTCTCTTTAAGAACCAACATTTATGAGCTCTTCTTCCCCAAGAAGCCTTTACTAGCCACAGACACAGACAACAAGAGATTTGTGATTCTCACTCTTGTAATCTTAATACTCTCCTATCTTGCTGCTATAGCAATACCAGATATTTGGTATTTCTTTCAGTTTCTAGGATCAACAACTGCACTGTGCCTTAGCTTTATTTTCCCTGGCACTATAGTTTTAAGGGATGCTCTTAGAATATCAACAAGAAAGGACAAAATAATAGCACTTGTTATGATTATACTTGCTGTAGTGACAAGTGCAATTGCAATTTCCACCAACATATACAATGCTTTAGGTAGCAAGTCATAG 1320 0.4061 MSPPSNGVHAPLLTGCNSAAGSGSIPGAVLNVASSIIGSGIMSIPAVLNVLGVFPSFTLFLIVAVLAEVSVEFLMRFTHAGETTTYSGVMKEAFGSAGALTAKVCIIINNFGALILFLIIIGDVLSGKKSGDEVHLGILQQWFGIQWWNSREVALLVTLVLVMFPLVLYRSVESLKYSSAVSTLLAVAFVVICSGLAIVALVQGKTQTPKLVPRLDYRTSFFDLFTAVPVIVIAFAFHFNVHPIGFELANPSDMKTAVRLAILFCVVIYFIIGLFGYLLFGDSIQSDILVNFDQSADSAVGSFLNTLIRVSYALHIMLVFPVVNFSLRTNIYELFFPKKPLLATDTDNKRFVILTLVILILSYLAAIAIPDIWYFFQFLGSTTALCLSFIFPGTIVLRDALRISTRKDKIIALVMIILAVVTSAIAISTNIYNALGSKS* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3069 439 PANTHER AMINO ACID TRANSPORTER 2 436 - -
Psa5g3069 439 Pfam Transmembrane amino acid transporter protein 23 425 IPR013057 -
Psa5g3069 439 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 2 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3069 Psa-Chr5 237141751 237144141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3069 1 433 Amino Acid or Auxin Permease AAAP Family AT3G56200 55.427 1.72e-162 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3069 - - gmx:100815694 636.721