Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3060 ATGGCTTCTTACTACTTCCTCTTGTTTGTTCTTGTTACTGCTTTTGCACTTTCTGAAGCAGATGACAATAAGTTATGCACATATTTCTATAGCGACAGTTGCCCGAAACTGTTGTCTATAGTAAATCGAGGAGTCATAAAAGCCATTCGTAATGAAGCTCGCATAGGAGCTTCATTACTTCGATTGCATTTCCATGACTGCTTTGTAAACCTAGGAGGCCCTTCTTGGGAAGTAGGATTGGGAAGAAGGGATTCCATCACAGCTAGTAGGGCTGATGCCAATAGGTATATTCCTGGACCATTTCTCAATCTTGACAAACTCAAAGAAAATTTTGCTAAACAAGGACTCTCAGAAAAGGACTTGGTAGCTCTTTCAGGCGCACATACAATCGGGCTAACCAGATGTTCGCTGTTTCGACCGCACATCTACAATGATTCCAACATTGATCCTTCATTTGCCAAGTCACTGCAGAGCAAGTGTCCCAGAACTGGAAACGACAACGTTTACCAACCATTCGACTTTCAAACTCCGACTCATTTTGATAACTTATACTACAAGCATTTACTTGCTAAAAAGGGTCTTGTCCATTCTGACCAGGAATTGTTCAATGGGAATCCCACTACTGATAAGCTGGTGCAGAAATATGCTAATGATAATGAAGAATTTTTCGAAGCCTTCGCCGAGGGTATGGTCAAAATGAGTAATCTAAACCCCCTCACAGGAAGCAAAGGACAGATCAGAATCAATTGCAGAAAAAACAATTGA 765 0.4118 MASYYFLLFVLVTAFALSEADDNKLCTYFYSDSCPKLLSIVNRGVIKAIRNEARIGASLLRLHFHDCFVNLGGPSWEVGLGRRDSITASRADANRYIPGPFLNLDKLKENFAKQGLSEKDLVALSGAHTIGLTRCSLFRPHIYNDSNIDPSFAKSLQSKCPRTGNDNVYQPFDFQTPTHFDNLYYKHLLAKKGLVHSDQELFNGNPTTDKLVQKYANDNEEFFEAFAEGMVKMSNLNPLTGSKGQIRINCRKNN* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3060 254 Gene3D - 25 70 - -
Psa5g3060 254 PANTHER PEROXIDASE 72-RELATED 70 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g3060 254 PANTHER PEROXIDASE 72-RELATED 7 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g3060 254 Pfam Peroxidase 70 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g3060 254 ProSiteProfiles Plant heme peroxidase family profile. 33 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g3060 254 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Psa5g3060 254 ProSitePatterns Peroxidases proximal heme-ligand signature. 120 130 IPR019793 -
Psa5g3060 254 Gene3D - 71 251 - -
Psa5g3060 254 PANTHER PEROXIDASE 7 70 - -
Psa5g3060 254 PANTHER PEROXIDASE 70 252 - -
Psa5g3060 254 SUPERFAMILY Heme-dependent peroxidases 25 254 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa5g3060 254 PRINTS Plant peroxidase signature 31 41 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g3060 254 PRINTS Plant peroxidase signature 171 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g3060 254 PRINTS Plant peroxidase signature 187 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g3060 254 PRINTS Plant peroxidase signature 228 241 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g3060 254 CDD secretory_peroxidase 29 252 IPR033905 GO:0004601|GO:0042744
Psa5g3060 254 Gene3D Peroxidase, domain 2 98 233 - -
Psa5g3060 254 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g3060 254 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g3060 254 PRINTS Haem peroxidase superfamily signature 173 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3060 Psa-Chr5 236382738 236383972 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3060 24 69 Peroxidase AT4G36430 56.522 6.14e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3060 K00430 - gmx:100793973 274.633