Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3059 ATGAGAGAATGGAAATTCACATGCTTCAAGGATCTTAGGAGTGTTTTGTGGCTTGTGTTGTTTTGTGTTTTGTTACAGAGCTTTGGTTTGTGTTGTTCTTTGAATGATGAAGGTAAAGCTCTTTTGAAGTTCAAGCAAGGAATTGTTAGTGATCCTTTTGGTGCTTTATCGAATTGGGTTGATGATGGAGTTTGGGTTGACCCTTGTAATTGGAATTTGAAAGACCTTTGTCTTGAAGGAAAACTTGCGAATGAGCTCGAGAGCCTTTTTCACATAAAGTCCATAGTTTTGCGGAATAATTCTTTTCACGGAATCATTCCCGAAGGAATTGTACGCTTGAAGGAATTGGAGGTTTTGGATTTGGGCTACAACAACTTCAGCGGTCCTCTAACGAAAGATATTGGGATTAATATCTCACTAACAATCCTTTTGCTGGACAACAATGATCTTCTTTGTGGTTTGTCGCATGAAATTAATGAATTGATGATGATTTCTGAGTCTCAAGTAGATGAAAACCAGCTAATTAGTGCAAGAAAATCGCCAGGTTGTACAGGAAGATCCATCAAATGGCTTAATCGCAAAAGTGAAAAAAGTCTTCGGAAGCTACTGCAATCAAGTACTCGTGATGATCGTCATAATCGTGCAGCTATTGTTCCAGATAGTCCTTCTCCGTCTCCGTCTCCGTCTCCGTCTCCATCTCCTTCACCTTCCCCTTCTACCTCGACAAGACCGCCAAAAGCGAAAAAACCATCTTCCCTTGATCGAAATGTTTCTGATTCTCCTTCTGCCTTGCCCGCACCACAATCCAAAAGTACCTCATCGAAGAAACAGCACACTCCTATTGTGGTTGGAGTTCTGGGTGGTGCTGCATTTATTATCGTTTCAATCATTGTCGTATATCTCTGGAAAACCAACAAGGTGGCGACCGTTAAACCGTGGGCTACCGGATTAAGTGGACAGCTTCAGAAGGCATTTGTGACAGGTGTGCCGAAGCTAAAGAGATCGGAGCTTGAAGCAGCGTGCGAAGATTTTAGTAATGTAATCGGTACTTCACCCGTTGGAAGCATTTACACAGTGTACAAAGGGACTCTATCTAGCGGTGTCGAAATAGCCGTGGCTTCTGTTACAGTGACATCGTTGAAAGATTGGTCAAAGACTTGTGAAGTCCAATTTCGTAAGAAGATAGATACATTATCAAAGATGAACCACAAGAATTTTGTAAATCTTCTTGGATTTTGCGAAGAAGACGAGCCTTTCACCAGAATGGTGGTTTATGAATATGCCCCAAATGGAACACTCTTCGAGCATTTACACATAAAAGAAGCCGAACATTTGGATTGGGGAACAAGACTTAGAGTTGCAATTGGCACGGCTTACTGCCTTCAACATATGCACCAGCTAAACCCTCCACTCGCCCATAGCAGCCTAAACACTTCATCCGTTCAACTCACTGACGACTACGCCGCCAAAATCTCGGACCTAAGTTTCTTGAAAGAAATAGCTTCACCCGATATAAAATCTTCTGCCAAGAAACGCACGGACGCGACATTAGCAAGTAACATTTACAGCTTCGGTATCATGTTACTCGAAACTGTAACGGGCCGTCTTCCTTATTCCAACGATCAAGACGGTTCACTTGAAAACTGGGCTTCAAACTATTTACAAGGGAACCAGTCTCTCAAAGAAATAGTGGATCCAACACTAGTATCCTTCCAAGAAGAACAATTAGTACAAATCGGCGCATTGATTAAGTCCTGTGTCAATGCTGATCAAGAGCAAAGACCAACAATAAAACAAGTTTGCGAAAGATTAAGAGAGATAACGAAAATAAGTCCCGAAGTAGCTGTTCCAAAACTTTCACCACTTTGGTGGGCAGAACTCGAGATTGCTTCTTTCGACGCCAGCTGA 1908 0.4219 MREWKFTCFKDLRSVLWLVLFCVLLQSFGLCCSLNDEGKALLKFKQGIVSDPFGALSNWVDDGVWVDPCNWNLKDLCLEGKLANELESLFHIKSIVLRNNSFHGIIPEGIVRLKELEVLDLGYNNFSGPLTKDIGINISLTILLLDNNDLLCGLSHEINELMMISESQVDENQLISARKSPGCTGRSIKWLNRKSEKSLRKLLQSSTRDDRHNRAAIVPDSPSPSPSPSPSPSPSPSPSTSTRPPKAKKPSSLDRNVSDSPSALPAPQSKSTSSKKQHTPIVVGVLGGAAFIIVSIIVVYLWKTNKVATVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTSPVGSIYTVYKGTLSSGVEIAVASVTVTSLKDWSKTCEVQFRKKIDTLSKMNHKNFVNLLGFCEEDEPFTRMVVYEYAPNGTLFEHLHIKEAEHLDWGTRLRVAIGTAYCLQHMHQLNPPLAHSSLNTSSVQLTDDYAAKISDLSFLKEIASPDIKSSAKKRTDATLASNIYSFGIMLLETVTGRLPYSNDQDGSLENWASNYLQGNQSLKEIVDPTLVSFQEEQLVQIGALIKSCVNADQEQRPTIKQVCERLREITKISPEVAVPKLSPLWWAELEIASFDAS* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3059 635 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Psa5g3059 635 Pfam Protein tyrosine and serine/threonine kinase 355 604 IPR001245 GO:0004672|GO:0006468
Psa5g3059 635 Gene3D Transferase(Phosphotransferase) domain 1 428 615 - -
Psa5g3059 635 MobiDBLite consensus disorder prediction 199 216 - -
Psa5g3059 635 Gene3D Ribonuclease Inhibitor 33 217 IPR032675 -
Psa5g3059 635 Gene3D Phosphorylase Kinase; domain 1 314 427 - -
Psa5g3059 635 MobiDBLite consensus disorder prediction 199 277 - -
Psa5g3059 635 SUPERFAMILY L domain-like 32 172 - -
Psa5g3059 635 PANTHER BNAA09G55080D PROTEIN 2 635 - -
Psa5g3059 635 MobiDBLite consensus disorder prediction 254 277 - -
Psa5g3059 635 MobiDBLite consensus disorder prediction 221 243 - -
Psa5g3059 635 SUPERFAMILY Protein kinase-like (PK-like) 339 623 IPR011009 -
Psa5g3059 635 ProSiteProfiles Protein kinase domain profile. 342 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g3059 635 PANTHER PROTEIN MALE DISCOVERER 2 2 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3059 Psa-Chr5 236327728 236330902 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3059 60 617 Receptor kinase-like Gene Family AT5G65700 25.729 2.47e-41 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Psa5g3059 PK_Tyr_Ser-Thr 1.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3059 - - gmx:100784541 833.943