Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3055 GAACAAGGAATATTGGTTCTCAACAATGCCATTACCTGTTGCACTGAATCAATAGAAAAACACAAGGGTAAACTTCTGGTGAAGGAGGCAGCCAGAGCGGTGAGTGAACGCGATGATAAACTGCTTGCTGAGCATATGGCTAAGCTACGCCAAGACAACGAAGAGGTCAGTGGCGATGAAGACAGTGAAGAGGAAGAAGATACTGGAATGGGTGCGGTTGATGTGGACAATGGTAATGCGATAACTGAGTGA 252 0.4603 EQGILVLNNAITCCTESIEKHKGKLLVKEAARAVSERDDKLLAEHMAKLRQDNEEVSGDEDSEEEEDTGMGAVDVDNGNAITE* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3055 83 MobiDBLite consensus disorder prediction 56 71 - -
Psa5g3055 83 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 1 83 IPR011488 GO:0003723|GO:0003743
Psa5g3055 83 Gene3D EIF_2_alpha 1 67 IPR024055 -
Psa5g3055 83 SUPERFAMILY eIF-2-alpha, C-terminal domain 1 59 IPR024055 -
Psa5g3055 83 PANTHER BNAC04G04870D PROTEIN 1 83 - -
Psa5g3055 83 Coils Coil 46 66 - -
Psa5g3055 83 MobiDBLite consensus disorder prediction 48 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3055 Psa-Chr5 235975995 235976331 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3055 1 83 Eukaryotic Initiation Factors Gene Family AT5G05470 66.667 1.66e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3055 K03237 - gmx:100815696 134.035