Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3052 ATGATGGGTTGGAGATGTAGCTGTGTTATCATAGTTACTCTGATGATGCTTCTGCCATTCATTGTTTCTTCCGGTTCTATTGTCAACAACCTGCCGGGTTTTGATGGCCAACTTCCATTCAACCTTCAAACTGGATACATAGGAGTGGGAGAAGGACAAAAGGTGAAAATATTTTACTATTTTGTAGAGTCTCAAAGAAATCCCTTAATTGATCCAATTTTGCTTTGGTTCGTTGGAGGTCCAGGATGCTCTGGCCTTTCGGCATTCTTTTTTGAAAATGGGCCTTTAGTAATGGATGGTGATTACAATGAGAACCTTCCAAAGCTTAAATTGAATCCTTATGGTTGGACACATATGTTGAATATGATTTACATAGATATGCCAGTTGGGACTGGATTTTCTTACTCAGAAACGCAAGAAGGCTATTATAGCAGTGATACACTCTGGGTGGATCATGCGTATTCTTTTTTACAAAAGTGGTTTATTGATCATTCAAATTTTAGCTCAAATCCATTTTATATTGGCGGTGGCTCATACTCAGGAATAACTACTGGTCCTCTTGTTCAAAAAGTATATGAAGGATACAAAGAAAGACATATGCCACACATAAACATCAAAGGTTATGTGTTGGCAAGCCCAGCTGTTGACACCTACCAGTATTATAACACACGAGTTTTATATGCTTACCATATGTCTCTAATACCAAAAGAACTTTATGAGTCGTTGGAAGAAAATTGTAAGGGTGATTATGTGAACATCGATCCAGACAACACAAAGTGTGTCTCGGATTATGAAGCTTATTATGAGCTCGTTCATTATATAAATGAACAAAATATTTTAGAACCTCTCTGTATGACTACACCTGCTGTGAACCAAGTAATTCAACAACCAGTTCAAGATGATCAAGAACTACAGTGTAGAAGTTATTATCATATCCTTGTTAACACATGGGCAAACGATGAAAATGTAAGGAAGGCCCTTCATATAAGAGAGGGAACTAAAGGGGATTTCTTGAGATGCAACAAAACTTTGGGATACACAAAAAATCTACCTAGTGTTGTAGATTATTATCACAATCTCACCAACGCCAACATCCAAGCTCTTATTTATAGTTCTGATCTTGACATGGTAGTACCACAAATGGGTACACAAGAATGGATAAGGTCATTCAATATGAGCATACATGACAAATGGCGTGCATGGTTTGTTGAAGGTCAAGTTGCAGGATACACAAAAATTTACAAAATGAAAGAAGACCACTACTTAACCTATGTGACCGTAAAGGGTGCTGGACATGTGGCCCAGACATTTAAGCCCAAGGAAGTTTATAATATGATCAAGAGGTGGTTTTCATTTTCTCTTATCTAA 1368 0.3735 MMGWRCSCVIIVTLMMLLPFIVSSGSIVNNLPGFDGQLPFNLQTGYIGVGEGQKVKIFYYFVESQRNPLIDPILLWFVGGPGCSGLSAFFFENGPLVMDGDYNENLPKLKLNPYGWTHMLNMIYIDMPVGTGFSYSETQEGYYSSDTLWVDHAYSFLQKWFIDHSNFSSNPFYIGGGSYSGITTGPLVQKVYEGYKERHMPHINIKGYVLASPAVDTYQYYNTRVLYAYHMSLIPKELYESLEENCKGDYVNIDPDNTKCVSDYEAYYELVHYINEQNILEPLCMTTPAVNQVIQQPVQDDQELQCRSYYHILVNTWANDENVRKALHIREGTKGDFLRCNKTLGYTKNLPSVVDYYHNLTNANIQALIYSSDLDMVVPQMGTQEWIRSFNMSIHDKWRAWFVEGQVAGYTKIYKMKEDHYLTYVTVKGAGHVAQTFKPKEVYNMIKRWFSFSLI* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3052 455 SUPERFAMILY alpha/beta-Hydrolases 28 451 IPR029058 -
Psa5g3052 455 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 452 IPR001563 GO:0004185|GO:0006508
Psa5g3052 455 Gene3D - 305 453 - -
Psa5g3052 455 Pfam Serine carboxypeptidase 32 451 IPR001563 GO:0004185|GO:0006508
Psa5g3052 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Psa5g3052 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Psa5g3052 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Psa5g3052 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Psa5g3052 455 Gene3D alpha/beta hydrolase 23 295 IPR029058 -
Psa5g3052 455 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 12 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3052 Psa-Chr5 235591417 235603006 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3052 22 51 Calmodulin-binding Proteins AT2G22960 63.333 7.95e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3052 K16296 - qsu:112035786 468.388