Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3034 ATGCGCAATCTAGCAGCTCAGCTCTCTAACTATTTATGTAGAACAAGAGTTGTAATCAATCAACAATCTCGTAAATTTTCATCTTCTAGTAGCAAAGAAGAACTAGCCTTGGAGCATGAAGTTGAGAGAAAATTTGGGTGGTTATTGAAAAGTCTATTTTTCGGCACTGCAATTTATGCGGGATACCAGTTCTTTCCTTATATGGGGGAAAATTTGATGCAACAGTCGGTATCTCTCTTGCGTGTCAAGGATCCCTTGTTCAAAAGGATGGGAGCTTCTAGATTAGCCCGTTTTGCAAAAGATGAAAGTGTTTTTGTTGAAATGAAGTCAATTCTAAGATCTGCAATGGACGGGCACAATGTGTGCATTTTCGCTTATGGTCAAACCGGCACAAGCAAGACATTCACCATGGATGGTACAAATGAGCAGTTAGGGTTGGGGCCATTCCAATTATTAGGTCTGCTCCAAGTTCACTTGAGGATGCAGATGTTGAGAAATTCAAGTCGAGCTTGA 513 0.4074 MRNLAAQLSNYLCRTRVVINQQSRKFSSSSSKEELALEHEVERKFGWLLKSLFFGTAIYAGYQFFPYMGENLMQQSVSLLRVKDPLFKRMGASRLARFAKDESVFVEMKSILRSAMDGHNVCIFAYGQTGTSKTFTMDGTNEQLGLGPFQLLGLLQVHLRMQMLRNSSRA* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3034 170 Gene3D Kinesin motor domain 72 163 IPR036961 -
Psa5g3034 170 ProSiteProfiles Kinesin motor domain profile. 57 170 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g3034 170 Pfam Kinesin motor domain 100 151 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g3034 170 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 103 - -
Psa5g3034 170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 156 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3034 Psa-Chr5 234677642 234680113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3034 99 148 Calmodulin-binding Proteins AT5G65930 52.000 3.40e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3034 - - gmx:100527372 151.369