Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3030 ATGGGAAGTTCGGTGCGTGTTAAAGAAGCTGTGGTGGTGACCCCTTCAGAGCCCACACCACCCTGTGTTATGTTACTTTCACCTCTAGACTCTCAACTCTTTCTCCGCTTCACCATAGAATATCTTTTAGTTTACCGGCCCGGGCCGGGCCTTGACAAGGTGGCAACCACGGCTCGGTTAAAAGCTGCATTAGCTAAAGCTTTGGTTGCTTATTACCCATTGGCTGGGAGGGTACGGCCCAGCCCGAATAGCACAGGCCTTGAGGTGTTGTGTCGAGCACAAGGAGCGATTTTCATTGAAGCTGTTAGTGATCGTTACACTGTCAATGAATTCGAGAAAGTTCCGAAAACGGTTTTGCAATGGAGGAAACTCTTGTCGCTTAGTGTCCCAGATGTTCTCAATGGATCGCCGCCGCTGATTCTTCAGCTGACATGGTTATCCGACGGTGGTGCAGCTTTAGGAGTCGGTATCAATCACTGCATCTGCGACGGAATTGGCGGGGCTGAATTTCTTAACTATGTGGCGGAGTTGGCTTCAGGAAAACGAGGATGTCCAAAACCGAAACCGGTTTGGGATCGTCACCTGTTCAATGTTCCACCTATGACTCGGGTTGATTCTACGAGTCACCCCGAGTTCAACCGAGTACCGGATCTATGCGGGTTTATGAACCGTGTCACGAATAATCTCAGGCCAACTTGTGTTATATTCGATAAGAGACGATTAATCGAACTCAAAGGTGTGGCTCGACGCACGTGTCAAATCGCTGACTCGTCGTTTACGTCGTTTGAAGTGCTTGCAGCGCACGTGTGGAGGAGCTGGGCGAGAGCAGTGGGGTTCCCGCCGAACCAGATACTGAAGGTGTTGTTCAGCGTAAACGTGAGGAACCGGGTCAAACCAGGTTTACCCGATGGATACTATGGAAATGCAATCGTAATGGCGTGCGCGCAGGCGAGTGCGAGGGAACTGGGAGAGAGAGGGATCGGGTTCGGGTCGGGTTTGGTGAAGAAAGCAAAGGAGAGAGTGGATAGTGAATATGTGAAGAGGGTGGCTGAGTTGGTGTCCGAGTCAAGAGCGAGTCCTGACTTGGTGGGTGTGTTGATACTGACGCAGTGGTCGAGGATGGGTCTCGACAGAGTTGAGCTTGGAATGGAGAAGCCGGTGTTTGTGGGGCCCATTTGCAACGAAAGGTACTGTTTGTTTGTGCCGGTGAAGGGTGAAAGAGACAGTGTCAAGGTCACGGTGGCTGTTCCCGCCGCTTCCTTTGATAATTACCATCGTTTCCTCCGGGAATAG 1293 0.5135 MGSSVRVKEAVVVTPSEPTPPCVMLLSPLDSQLFLRFTIEYLLVYRPGPGLDKVATTARLKAALAKALVAYYPLAGRVRPSPNSTGLEVLCRAQGAIFIEAVSDRYTVNEFEKVPKTVLQWRKLLSLSVPDVLNGSPPLILQLTWLSDGGAALGVGINHCICDGIGGAEFLNYVAELASGKRGCPKPKPVWDRHLFNVPPMTRVDSTSHPEFNRVPDLCGFMNRVTNNLRPTCVIFDKRRLIELKGVARRTCQIADSSFTSFEVLAAHVWRSWARAVGFPPNQILKVLFSVNVRNRVKPGLPDGYYGNAIVMACAQASARELGERGIGFGSGLVKKAKERVDSEYVKRVAELVSESRASPDLVGVLILTQWSRMGLDRVELGMEKPVFVGPICNERYCLFVPVKGERDSVKVTVAVPAASFDNYHRFLRE* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3030 430 Pfam Transferase family 4 420 - -
Psa5g3030 430 Gene3D - 222 427 IPR023213 -
Psa5g3030 430 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 427 - -
Psa5g3030 430 Gene3D - 2 214 IPR023213 -
Psa5g3030 430 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3030 Psa-Chr5 234082111 234084080 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3030 5 430 Monolignol Biosynthesis Gene Families AT5G48930 28.222 4.55e-45 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3030 - - gmx:100803812 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3030 5 234082111 234084080 Psa5g3030 5 234082111 234084080 ECH