Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2997 ATGGCTTTCAGAGCCACTGGAACACTCATTTTGGCGTCTCTCATTTGGATTTTCTTCCTCTGTGCAACCATTGCATTCTTTCAGCTCAAATTGGTTGACAACAGAACCCATCAAGCGTCTTCTCACGATAAGGATACCCTTTTGGAAGATGATTTGGAGGATGTGACCCATAAAGTCTATTTTGACATAGAGATCGATGGAAAATTATCGGGTCGTGTAGTCATGGGACTTTTTGGGACCACAGTTCCGAAAACTGCAGGAAACTTCCGTGCGCTCTGTACAGGAGAGAAAGGGGTAGGAAGAAGTGGGAAGCCTCTTCATTATAAAGGTAGCGCATTCCATAGGATAATACCAAGCTTCATGGTCCAAGGAGGTGATTTCACAAGTGGCGATGGAAGAGGTGGAGAATCAATCTATGGTGATAAGTTTCCTGACGAAAATTTCAAGCTGAAGCATATCGGGCCAGGATACTTATCGATGGCAAATTCTGGGCAAGATACCAATGGCTCTCAGTTTTTCATAACAACAGTAAAAACCAGCTGGCTTGATGGACGCCATGTTGTATTCGGCAAGGTACTTTCTGGTATGGATGTTTTGTACAAGATTGAAGCAGAAGGAAGTGAAAGTGGCTTTCCAAAACGCAAGGTTGTCATATTAAACAGTGGGGAATTGACTTCATGA 681 0.4332 MAFRATGTLILASLIWIFFLCATIAFFQLKLVDNRTHQASSHDKDTLLEDDLEDVTHKVYFDIEIDGKLSGRVVMGLFGTTVPKTAGNFRALCTGEKGVGRSGKPLHYKGSAFHRIIPSFMVQGGDFTSGDGRGGESIYGDKFPDENFKLKHIGPGYLSMANSGQDTNGSQFFITTVKTSWLDGRHVVFGKVLSGMDVLYKIEAEGSESGFPKRKVVILNSGELTS* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2997 226 CDD cyclophilin_ABH_like 57 222 - -
Psa5g2997 226 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 60 223 IPR002130 GO:0000413|GO:0003755
Psa5g2997 226 SUPERFAMILY Cyclophilin-like 55 224 IPR029000 -
Psa5g2997 226 Gene3D - 46 226 IPR029000 -
Psa5g2997 226 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 60 220 IPR002130 GO:0000413|GO:0003755
Psa5g2997 226 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 108 125 IPR020892 GO:0003755|GO:0006457
Psa5g2997 226 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 32 224 - -
Psa5g2997 226 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-2 32 224 - -
Psa5g2997 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 77 92 IPR002130 GO:0000413|GO:0003755
Psa5g2997 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Psa5g2997 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 156 171 IPR002130 GO:0000413|GO:0003755
Psa5g2997 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 171 183 IPR002130 GO:0000413|GO:0003755
Psa5g2997 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 184 199 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2997 Psa-Chr5 230582693 230586341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2997 71 221 U-box Gene Family AT5G67530 43.137 5.12e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2997 K01802 - gmx:100792649 379.407