Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2992 ATGAAGAAACCACCTTCTTCCACCGTCATCACATATCTCATCACCGTCACTGCTTTAATTGTCTTCTGTTTTTCACCGTTTTCCCATGCTTTAGGCTCCGGCACTACCCTCTCCGTCACCGACTCACCTGCCACCGTCTGCGGGATCATATCAGGACAATCAATACAGAGCATTCAGTGTTACCGTCAAGGTCAAGGACAAGTCTCCCCCTTCCTCGTCGCTCCCAACGTTTCTTTTTCTTCAATCTCCGGTGGGAAAAGCTACTTCTGTGGCCTTAGGTCCGGTAACTATAGTTTACATTGTTGGGATACTTCATCTTCTTCCTTCCAAAGTAAAAGACTTTACTTTAACGACTCTGTTTTATTAGAGAATCTCGCCGTTGGAGATTCCCAGGTTTGTGCCACGGTGGTCGGTGTTGGAACGGTTCGATGCTGGAGAACCGGTAACCGGTTTGAACTATCTGGGTCGGATCAATTTGATTCGATTTCATCTGGGTCGAAATTCTCTTGTGGGATTTTGAAAAATGGTTCACAAGTTCGATGTTGGGGAGAGAAAGCTGTTGCGGAACGGTTACAGAATGAGTTTGGGAACATGTCTATGTTGAGTATTGTAGCGGGTGGTTCGCATGTTTGTGGTTTGAATTCAACTGGTTTTTTGGTTTGTAAAGGAAGTAACAGTTCTGGACAAGTTGATGTTCCACAAGGGGGTGCTTTTGAGTTTGGTGAATTGGCACTTGGAGATGAACATGGTTGTGCTATGAGAAGATTGAATGGTTCTGTTGTTTGTTGGGGTGGAAGGGGACAATTTTTGGTGAATTTTGTTGAAAGTGTTTCTTTTGAGTTAATTGTTTCTGCTTCTAATTTTACTTGTGGATTGACAACAACCAATTTTTCGGTTATTTGTTGGGGACCAGGTTGGTCTAATCGATCAAATGGTTCTGAATCTGTTCTTCCTTTGTCTCGTGTTCTTCCGGGGCCTTGTGTTCAATCTTCTTGTAGTGAGTGTGGAATTTATCCTGATTCTCAATCATTATGTTCTAGTTCAAACCGTCACATTTGCAAGCCAAATATATGTAACACTCAAATAACAAATCCGCCGCCTCCGCCAGTTCAACCTCCACCGCCAGTGTCTCCTCCTCGGCCGTCTCGATCGAAGACATTGACAAGAGGCTTATTGGCATTCGCAATTGTTGGATCAGTTGGTGCTTTTATTGGTATATGCTCTATAGTTTATTGCTTATGGAAAGGTGTTTGTTTTGGTAAAAAGAAGGTTCACAATTCAGTGCAACCAACAGTCACAAGAGGTAGTAGCAACAGTTCAAATACTAGCTCATCTTCGATTAAATCGGCCATTATGCGTCAAGGTTCAAGAATAATGAGGCGACAGAGGAGTGGACCTTCAACAACAAAGCATCAAGAAAGGGCAGAAGAGTTTACTCTCTCCGAGCTAATAGCCGCTACCGACGGTTTCTCATTCCAGAACAAAATTGGTGCTGGAAGCTTTGGTATTGTGTATAGAGGAAAACTAACAGACGGTAGCGAAGTAGCTATTAAAAGAGGTGAAACAGGTTCAAAGGTTAAAAAATTTCAAGAGAAGGAGAGTGCATTTGAGTCAGAATTATCCTTTTTGTCGCGATTACACCACAAACACTTGGTTAGACTAGTTGGTTATTGCGAGGAGAAAGACGAGAGGCTTTTGGTTTACGAGTACATGAAGAATGGTTCATTGCATAGTCATTTGCATGATAAGAACAATGTAGAAAAAAGTAGCAGTTTGTTGAATTCATGGAAAATGAGGATCAAAATTGCTTTGGATGCTTCAAGAGGAATAGAGTATCTACATAACTACGCAGTTCCTTCAATAATTCATAGAGATATAAAATCTTCAAATATTCTTCTTGACTCAACCTGGACAGCGCGAGTATCTGATTTCGGATTGTCATTGATGAGTCCAGAAGCTGATATCGATTACAAACCAACAAAAACGGTAGGAACAGTTGGTTATATCGATCCGGAGTACTATGGTTTGAATTTATTAACAGCAAAAAGCGATGTATATGGACTTGGAGTTGTATTACTAGAATTATTAACAGGAAAAAGAGCTATATTTAGAAACGGTGAAGACGGAGGAAATCCATTGAGTCTAGTCGATTTTGCAGTGCCTGCTATTTTGGCCGGTGAATTGGCGAAAATTTTGGACTCGAGAGTTGGATCACCGCGGGAGAGTAACGAATCAGAGGCGGTCGAGTTGATGGCATATACAGCTGTGCATTGCGTGAATTTGGAAGGGAAAGATAGACCAACGATGGCTGATATTGTTGCGAATTTGGAGAGAGCATTGCTTATTTGTGAGGGTGGTAGTAACAATGAGATTGAAAGTATTTCAAGTGTTACTATCTCTGTTGTTTCAGATTGA 2415 0.4153 MKKPPSSTVITYLITVTALIVFCFSPFSHALGSGTTLSVTDSPATVCGIISGQSIQSIQCYRQGQGQVSPFLVAPNVSFSSISGGKSYFCGLRSGNYSLHCWDTSSSSFQSKRLYFNDSVLLENLAVGDSQVCATVVGVGTVRCWRTGNRFELSGSDQFDSISSGSKFSCGILKNGSQVRCWGEKAVAERLQNEFGNMSMLSIVAGGSHVCGLNSTGFLVCKGSNSSGQVDVPQGGAFEFGELALGDEHGCAMRRLNGSVVCWGGRGQFLVNFVESVSFELIVSASNFTCGLTTTNFSVICWGPGWSNRSNGSESVLPLSRVLPGPCVQSSCSECGIYPDSQSLCSSSNRHICKPNICNTQITNPPPPPVQPPPPVSPPRPSRSKTLTRGLLAFAIVGSVGAFIGICSIVYCLWKGVCFGKKKVHNSVQPTVTRGSSNSSNTSSSSIKSAIMRQGSRIMRRQRSGPSTTKHQERAEEFTLSELIAATDGFSFQNKIGAGSFGIVYRGKLTDGSEVAIKRGETGSKVKKFQEKESAFESELSFLSRLHHKHLVRLVGYCEEKDERLLVYEYMKNGSLHSHLHDKNNVEKSSSLLNSWKMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILLDSTWTARVSDFGLSLMSPEADIDYKPTKTVGTVGYIDPEYYGLNLLTAKSDVYGLGVVLLELLTGKRAIFRNGEDGGNPLSLVDFAVPAILAGELAKILDSRVGSPRESNESEAVELMAYTAVHCVNLEGKDRPTMADIVANLERALLICEGGSNNEIESISSVTISVVSD* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2992 804 SUPERFAMILY RCC1/BLIP-II 29 264 IPR009091 -
Psa5g2992 804 MobiDBLite consensus disorder prediction 365 384 - -
Psa5g2992 804 SUPERFAMILY Protein kinase-like (PK-like) 468 776 IPR011009 -
Psa5g2992 804 ProSitePatterns Protein kinases ATP-binding region signature. 496 518 IPR017441 GO:0005524
Psa5g2992 804 Gene3D - 122 361 IPR009091 -
Psa5g2992 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Psa5g2992 804 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 2 791 - -
Psa5g2992 804 MobiDBLite consensus disorder prediction 431 474 - -
Psa5g2992 804 Gene3D Transferase(Phosphotransferase) domain 1 571 790 - -
Psa5g2992 804 MobiDBLite consensus disorder prediction 431 452 - -
Psa5g2992 804 Gene3D Phosphorylase Kinase; domain 1 451 570 - -
Psa5g2992 804 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 2 791 IPR044815 GO:0004674
Psa5g2992 804 MobiDBLite consensus disorder prediction 365 381 - -
Psa5g2992 804 Pfam Protein kinase domain 491 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2992 804 ProSiteProfiles Protein kinase domain profile. 490 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2992 804 SMART serkin_6 490 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2992 Psa-Chr5 230404108 230407375 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2992 1 804 Receptor kinase-like Gene Family AT3G55950 57.669 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Psa5g2992 Pkinase 1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2992 - - gmx:100786639 1097.03