Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2988 ATGGCTTATTTAGTCTTCTTCTTCATTTTCTTCTTCGTCTTTCTCTTCCTTCTCAGAAAACTCCGTTACGGTAGACTCCGACTACCGCCGGGGAATCTCGGTTTACCGTTCATCGGAGAAACCTTACAGATGATATCAGCATACAAGACTGACAATCCAGAGCCTTTTCTGGATCAGCGAGTCAACCGATACGGTTCAGTCTTCACTAGCCATGTTTTTGGTGAACCGACAGTTTTCTCGACTGATCCAGAAACGAACCGGTTCATTCTCACGAACGATAAGCTTTTCGAATGTAGCTACCCCGGTTCAATATCGAACCTTCTCGGAAAACACTCGCTGCTTCTCATGAAAGGCTCTCTTCACAAGAAAATGCATTCTCTCACCATGAGCTTCGCTAATTCGTCCATCATTAAAGATCATCTTCTTTATGATATAGACCGACTCATCCGGCTCAACATAGATTCTTGGTCCGACCGGATTCTTCTCATGGAGGAAGCTAAGAAGATAACATTTGAGTTGACAGTGAAACAGTTGATGAGTTTTGATCCAGATGAATGGACAGAGAGTTTAAGGAAAGAGTACATGCTTGTAATTGAAGGCTTTTTCACTATTCCTTTTCCTCTTCTGTCTCCCACCTACCGCAGAGCCATCAAGGCAAGAACGAAGGTGGCAGAGGCACTGACAGTAGTTGTGAGGAATAGGAGAAAAGAGTTTGAGACAAAGGAAGAGAAAAAGAATGACATGCTTGGAGCATTGTTGGCATCAGGTGAACAATTCTCGGACGAGGAAATTGTTGATTTTATGTTGGCTTTGCTTGTAGCTGGTTATGAAACTACTTCTACTATTATGACTCTTGCCATCAAGTTCCTCAATGAGACTCCTTTGGCTTTGGCACAGCTCAAGGAAGAACATGAACAAATCAGAGCAAGGAGTGAGCCAGGGGCAGCACTGGAATGGACAGATTACAAATCAATGGCATTTTCTCAATGTGTTGTGAATGAGACCTTAAGGGTGGCAAACATAATCGGTGCGATATTTAGGAGAACAACAACAGACATCGACATAAAAGGTTACACTATTCCAAAGGGATGGAAGGTCATTGCATCGTTTCGTGCTGTGCATTTGAATCCAGAATATTTCAAAGATGCCCGCACCTTCAATCCATGGAGATGGCAGAGTAATAATAACTCAGAAGCTGTAGCAACCCCTGGGAATGTATTTACACCATTTGGAGGAGGACCAAGGTTGTGCCCGGGCTATGAACTTGCAAGAGTTGTTCTTTCGGTTTTTCTTCACCGCTTTGTCACGCGCTTCAGTTGGGTTCCTGCTGAAGAAGATAAGTTGGTGTTTTTCCCAACTACTAGGACACAGAAGAGGTATCCTATTATATTGAAGCGGAGAGAAGAATCGAGATCAAACATGGGATTTGGGATCACAGCAGAAACAGAAAGGCGAAAAGAGAGCTGA 1467 0.4342 MAYLVFFFIFFFVFLFLLRKLRYGRLRLPPGNLGLPFIGETLQMISAYKTDNPEPFLDQRVNRYGSVFTSHVFGEPTVFSTDPETNRFILTNDKLFECSYPGSISNLLGKHSLLLMKGSLHKKMHSLTMSFANSSIIKDHLLYDIDRLIRLNIDSWSDRILLMEEAKKITFELTVKQLMSFDPDEWTESLRKEYMLVIEGFFTIPFPLLSPTYRRAIKARTKVAEALTVVVRNRRKEFETKEEKKNDMLGALLASGEQFSDEEIVDFMLALLVAGYETTSTIMTLAIKFLNETPLALAQLKEEHEQIRARSEPGAALEWTDYKSMAFSQCVVNETLRVANIIGAIFRRTTTDIDIKGYTIPKGWKVIASFRAVHLNPEYFKDARTFNPWRWQSNNNSEAVATPGNVFTPFGGGPRLCPGYELARVVLSVFLHRFVTRFSWVPAEEDKLVFFPTTRTQKRYPIILKRREESRSNMGFGITAETERRKES* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2988 488 PANTHER CYTOCHROME P450 26 6 466 - -
Psa5g2988 488 PANTHER CYTOCHROME P450 90A1 6 466 - -
Psa5g2988 488 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2988 488 PRINTS P450 superfamily signature 330 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2988 488 PRINTS P450 superfamily signature 408 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2988 488 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2988 488 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2988 488 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2988 488 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2988 488 PRINTS E-class P450 group I signature 329 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2988 488 PRINTS E-class P450 group I signature 369 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2988 488 PRINTS E-class P450 group I signature 407 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2988 488 PRINTS E-class P450 group I signature 417 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2988 488 Pfam Cytochrome P450 29 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2988 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 410 419 IPR017972 GO:0005506|GO:0016705
Psa5g2988 488 SUPERFAMILY Cytochrome P450 21 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2988 488 Gene3D Cytochrome P450 19 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2988 Psa-Chr5 230111068 230116333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2988 116 468 Cytochrome P450 AT5G05690 78.470 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2988 K09588 - gmx:100781291 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2988 5 230111068 230116333 Psa5g2988 5 230111068 230116333 ECH
Psa5g2988 5 230111068 230116333 Psa2g0782 2 47526004 47530297 PCT