Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2970 ATGGGAAAGAAACGGAGCTCAACTCAAATCGAGAAGCTTTCCGCTCCCAAAGAAGACGAGCCACCCACCCCCGCCCCCAGAGACGACGGAAAACCACATCCGGAAGAAGACAAAGTCTCCGAACATGAAGATGATGAAGATTCATCAGCTTCTTCGTCTGAAGCGGAAGAAGATGACGATGAAGAAGAGGACACCCCTTCCAAAAACTCAAGTCCACCGCTGACCAACCCTCGTCCCAAAACCGAAGACGATTCAGACTCTGAAGACGATGAAGATGAAACTGATTCAGACTCTGAAGATGAACCTGCTCCCAAGCTCAAATCCCTCAACTCAAACTCAAAGCCTGTGGATCAGATCAAATCGAAGGCCGTACCCAAACCCTCCTCTGCACCACCAGCCAGATCTGGAACCAAACGTCCGGTTGACAATGATCCTATACAATCAAAGAAGAGGAAAACTCAAGCTCCTGCTGAGGAGGACAACAAGAAGTCCGGGGATGAGTCTAAGAAGTTGTTTCAGAGAGTCTTCAATGAGGATGATGAAATGGCCATTCTCAAAGGTATATATGATTTCATTACCAAAACAGGGACCGATCCTTTTAAGTACCACACGGCTTTTTATGAGTTTGTGAAAAAGTCGATTCACATCAAAGTTACACTGGAGCAGCTCAGAGATAAGATGCGGAGGCTGAAGCATAAATACGAGACTAAGGCCAAGAGTGGAAAAACTCCTAATTTCACCAAAGATAACAACCGGATAATGTTTGAATTTGGCCAAAAGATTTGGGGTGGTAAACTCAATGTTAATGAAGCTGAAGAAAAGGGAAAACCTAATGGGAAACTTTCCAAGAAGGAACCTGCGGCTAAGAAACCAAGAACAACTAAGAAATTGGTTTTGGAACCTGATTCACCGCTGCCTGTTGTGAAGGAAACGAGGAAGGTGGAAAGTACTGATACGGAGAATCCTGGTTCTGGTTCCGGTTCGATTCTGGCTTTGAATGAACTGATTCGTTTTGACGAGAGTGTAAGTGGCTCTGGGAAGACTGTGGGTGCGTTGAAGAGGGGATTGGAGTTAATGGGGGAATCAGAGAGGGAAGAGTTGGAGAGAAGGTGGGAGAAGGTGCAGGTTGCTGAACTGGAGGTGTTCAAGATGAGAGCTGATTTGGCTGTGGATCAGGCTATATCGATATTGGATGCATTGAAGTCGTCATCAGGCGATTAG 1221 0.4595 MGKKRSSTQIEKLSAPKEDEPPTPAPRDDGKPHPEEDKVSEHEDDEDSSASSSEAEEDDDEEEDTPSKNSSPPLTNPRPKTEDDSDSEDDEDETDSDSEDEPAPKLKSLNSNSKPVDQIKSKAVPKPSSAPPARSGTKRPVDNDPIQSKKRKTQAPAEEDNKKSGDESKKLFQRVFNEDDEMAILKGIYDFITKTGTDPFKYHTAFYEFVKKSIHIKVTLEQLRDKMRRLKHKYETKAKSGKTPNFTKDNNRIMFEFGQKIWGGKLNVNEAEEKGKPNGKLSKKEPAAKKPRTTKKLVLEPDSPLPVVKETRKVESTDTENPGSGSGSILALNELIRFDESVSGSGKTVGALKRGLELMGESEREELERRWEKVQVAELEVFKMRADLAVDQAISILDALKSSSGD* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2970 406 PANTHER STOREKEEPER PROTEIN-LIKE 45 403 - -
Psa5g2970 406 Coils Coil 220 240 - -
Psa5g2970 406 MobiDBLite consensus disorder prediction 84 99 - -
Psa5g2970 406 MobiDBLite consensus disorder prediction 1 169 - -
Psa5g2970 406 MobiDBLite consensus disorder prediction 272 297 - -
Psa5g2970 406 MobiDBLite consensus disorder prediction 272 326 - -
Psa5g2970 406 PANTHER BNAANNG10740D PROTEIN-RELATED 45 403 IPR007592 GO:0006355
Psa5g2970 406 MobiDBLite consensus disorder prediction 1 39 - -
Psa5g2970 406 MobiDBLite consensus disorder prediction 143 169 - -
Psa5g2970 406 MobiDBLite consensus disorder prediction 40 65 - -
Psa5g2970 406 Pfam Protein of unknown function, DUF573 172 263 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2970 Psa-Chr5 228813016 228816129 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2970 81 263 GeBP Transcription Factor Family AT1G61730 38.298 3.84e-24 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Psa5g2970 DUF573 3.1e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2970 - - cam:101509961 301.212