Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2966 ATGGCAAAACCTTTTTCTAATGAATCTAGTGCAGTCACCATCCTCTCAAAATGCACTGTTTTCCCAGACAAGAAATCATCTCTTGGAGACTTAAAACTCTCTGTCTCAGACCTCACCATGATATGTGCTCAATACATTCAAAAAGGCTGTCTCTTCACAACTCCATCTCTCCCCTCTCAAACTCTCATTCCTCAGCTTATTGCTTCTCTCTCTAAAACCCTCTCTCTCTTCCCTCCACTCGCTGGCCGTTTCGTCACTTACCTCGCCGACGGGATCTTCATCGGTTTTGCCGTATCTCATGCTGTCACAGACGGTACTACCGTCTGGAACTTCTTTAACACGTTCGCTGAGATTTCCAGGGGAGTCACACAACCTACTAGAATCCCTGATTTCCGCCGGGATTCTATTCTGAACTCAAAAGCCGTCCTTCGTTTATCGGAAGACGACATCAATCCGAACTCCAAAGCTGACGATTCCGTACGGGAGAGAATTTTCAGCTTTAGCCAGGAAGCAATTCAGAAGCTAAAAGCGAGAGTGAATCGCAACCGTACATTACCGGCGGAGATTTCGTCGTTTCAGTCACTCTCCGCTCTAATGTGGCAATGCGTTACACGCGCTAGAAAACTTGAGGGTAATAAAAGAACGACGGTTAGAATGGCCGTGAATATTCGTAACCGTTTGGAGCCGAAGTTATCAGAGTATTATTTTGGGAACGCGATTCAGAGCATTGTCACGTTTGCATCTGCTGGTGATGTTATTGATAGAGATCTTACGTGGTGCGCGGAGCAGCTGAATAAGAATATTAGGGAGTACAATAGTGATGTGGTGTGGCGCGTCGTAGAGGATTGGGAGCGCGAGCCGAAAGCTGTGAAGATGGGGAATCACGACGGTGGGATAGTGCAGATTGGTAGTTCGCCTAGATTTCCTATGTATGATAATGATTTTGGATGGGGGAGACCGTTGGCGGTGAGGAGCGGTGGGGGAAATAAGTTTGATGGCAAGATGTCGGCGTTTCCGGGGAGGGAAGGCGGCAACGCTGTCGACTTGGAGGTGGTTTTGGCGACGGATACGATGGGGATACTTGAGAACGATCCTGAGTTCTTGCTTTACGCTTCTTGTCAGCAATGA 1128 0.4778 MAKPFSNESSAVTILSKCTVFPDKKSSLGDLKLSVSDLTMICAQYIQKGCLFTTPSLPSQTLIPQLIASLSKTLSLFPPLAGRFVTYLADGIFIGFAVSHAVTDGTTVWNFFNTFAEISRGVTQPTRIPDFRRDSILNSKAVLRLSEDDINPNSKADDSVRERIFSFSQEAIQKLKARVNRNRTLPAEISSFQSLSALMWQCVTRARKLEGNKRTTVRMAVNIRNRLEPKLSEYYFGNAIQSIVTFASAGDVIDRDLTWCAEQLNKNIREYNSDVVWRVVEDWEREPKAVKMGNHDGGIVQIGSSPRFPMYDNDFGWGRPLAVRSGGGNKFDGKMSAFPGREGGNAVDLEVVLATDTMGILENDPEFLLYASCQQ* 376
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2966 375 Pfam Transferase family 11 84 - -
Psa5g2966 375 Pfam Transferase family 85 367 - -
Psa5g2966 375 Gene3D - 7 85 IPR023213 -
Psa5g2966 375 Gene3D - 86 153 IPR023213 -
Psa5g2966 375 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 187 371 - -
Psa5g2966 375 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 9 86 - -
Psa5g2966 375 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 85 183 - -
Psa5g2966 375 Gene3D - 157 365 IPR023213 -
Psa5g2966 375 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 187 371 - -
Psa5g2966 375 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 85 183 - -
Psa5g2966 375 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 86 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Psa5g2966 Psa-Chr5 228672549 228674236 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2966 55 362 Monolignol Biosynthesis Gene Families AT5G48930 24.691 6.31e-29 114
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2966 - - cam:101506439 426.017