Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2959 ATGGAAATGCTAGACAACTATACCTCGCGCAATAAAGTTTATGGATGTTACGACACAGCTGTGTCTAATGCCAATGATATATGGCAAAGTGATAGCGTTTTAACATTTTATCTTCCGAATTTCGCAGCTCAAATTGCTTTCATGTTGTTCGCTAATCGTTGTTTATACTACCTCTTTCGACCCTTCAATCAACCTCGATTTGTTGTTGAGATTCTGGTCGGTTTCATGTTAAGTCCAGAAGTATTTGGGAGAACACAGTTTTTCCAAGCTTTGGCTCCTGTAAAGTTAGTGGTAACAAATGAAACCATATCTTACGTGGGACTTGTTTACTATGTATTCCTTGCTGGATTAGACATGAACTTGGAAACGATTACGAGTGCGAGAAAGAAAGCTACAACAATTGCTATTGTAGCTACTGTAATTCCAATGATAATGGGAGGTGCAATGTATACTTTACTTCAAACCATGTACACAGGACCTCCTGAGTATTTATCGCGTTACAACACGAATAAAGCTTATATGTTTTGGACATTAATCTATAGTGTCACAGGTTTTCCTATTGTTACTCAAATCCTTGCAGATTTGAAACTTCTCTATACAGGTCTTGGTAGAGCTGCTTTAACAGTAGCAATGATTATTGATTTCTACAATTGGGTTATGTTTGCTTTGCTGATTCCATTTGCACTTAATGAAAAGGTTGCTATGTACTCGGTGATAAGTACGGTGTCGTTTGTCCTTGTATGCTTCATAGTGATTCAGCCTCATCTTGTTCAGTTAGTCGTCCGAAAAACAAATCAGAACGAATGGGACAATTGTCAGCTGTTTTATGTTGTGATGGGAGCTTATCTTTTTGCATTTGTTACTGACTTTCTCGGGACGCACCCTGTTGTTGGTGCATTAGTATACGGAATAATGTTGCCGCGCGGTAAATTTTCCAATCTGTTGATAGAGAAGACAGAGGATTTTGCTTCTGTTTATCTGGCTCCACTCTTCTTTGCTAGCTGTGGTGTGAGACTTCGAATATTTAGCGTCATCGAATCTCAAGGTTTGGCCCTTGTGGTGATAGTTTTGGTCCTGTCATGTATCCCTAAGGTTTTGAGCACTGTCATAGCAACTCAGTTATTTGGTATGCCTGTTCATGATGGTGTGGCTATTGGATTGCTTATGAACACCAAAGAAATCTTACCTCTAATAATGCTCATTGTTGCTTGGGACAAAGAGATATTGAGTGTGGAATCGTACTCGATTATAATCATGTCTGTTTTTCTAATGACGCTATTGGTACCTATTATAATCAATGGTATATACAAACCAAGACAGCTTTACAAGCAAAACAAGCTAAGAACAATACAGAATCTAAAGGTGGAAGCAGAAGTAAAAATTTTAGCTTGTGTCCACAATCCTCGTCAAGCCACGGGAATGATCAACATTCTCGAAGCTTCCAATGCCATAAAACTATCTCGGTTACGCATATTTGCACTTCATCTAGTCGAAATAACGGGAAACACAGCAGCCCTTTTAGCAGCACATATCAATACACAAAGTGGATCACAATCCCTCACAGATTCAGAACAAGACTTAGAAAACATAACTATCACTTTCAAAGACTATGCAGAACAAAATGAAAATATTAGTGTTGATATATTAGCTGCAGTTTCAACCTACTCAACCATTCACGAAGACATACACATTGTAGCACGAGAAAAACAAGCAACATTGATTCTCCTCCCTTTTCACAAACAATCAAACATAGAAGGTATTCTAGAAACAATGAACGAAGCGTTTAAAGATATAAACCAAAGTGTGATGAGAGATGCGCCGTGTTCTGTTGCAATCTTTGTTGATCGCGGTCTCGGTTCATTGTTCAAAGTTAATTTACGTCTACTTATGGTATTCTTCGGAGGTCCTGATGATCGGGAAGCGTTAGCATTAGCATGGAGAATGTCAAAGCATGAAGGAATTCAGTTATCTGTTGTGAGAGTTAATATGTTAGGAGAAGCTGCTCAAGTTGATTTATCACCACAAGCAGAATCAAGAGAACTATTTTGTGCAGTGATGGACTGTGAAAAGCAAAGAGAGTTTGATGATGAGTATGTGAGTTCTTTTAGACTTAAAGCAGTGAACAATAAAGATTCTATAAGTTATTCAGAAAAAGAAGTTCATTCTGGCGAAGATATTCCTCTAATGATGGAAGAGTTGGACAAAGTTGGATATGATTTGTACATTCTAGGACAAGGGACAGGAAGAAATTCTTTGATGTTGTCGGATTTACTGAAATGGTCCGATTGTCCTGAACTTGGTGTTATAGGGGACATGGTTGCATCAAATAATTTTGGTTCATGTTCTTCGTTGCTTGTTGTACAACAATATGGTTTTGGAGGGATGGTTTTTGAGAATACCACTCAAAATCCTTGTCAACTGCCTAAAAATGATTGTGAATCTGAGGATGTTTATGTGGAGGTAGAACTATAG 2472 0.3811 MEMLDNYTSRNKVYGCYDTAVSNANDIWQSDSVLTFYLPNFAAQIAFMLFANRCLYYLFRPFNQPRFVVEILVGFMLSPEVFGRTQFFQALAPVKLVVTNETISYVGLVYYVFLAGLDMNLETITSARKKATTIAIVATVIPMIMGGAMYTLLQTMYTGPPEYLSRYNTNKAYMFWTLIYSVTGFPIVTQILADLKLLYTGLGRAALTVAMIIDFYNWVMFALLIPFALNEKVAMYSVISTVSFVLVCFIVIQPHLVQLVVRKTNQNEWDNCQLFYVVMGAYLFAFVTDFLGTHPVVGALVYGIMLPRGKFSNLLIEKTEDFASVYLAPLFFASCGVRLRIFSVIESQGLALVVIVLVLSCIPKVLSTVIATQLFGMPVHDGVAIGLLMNTKEILPLIMLIVAWDKEILSVESYSIIIMSVFLMTLLVPIIINGIYKPRQLYKQNKLRTIQNLKVEAEVKILACVHNPRQATGMINILEASNAIKLSRLRIFALHLVEITGNTAALLAAHINTQSGSQSLTDSEQDLENITITFKDYAEQNENISVDILAAVSTYSTIHEDIHIVAREKQATLILLPFHKQSNIEGILETMNEAFKDINQSVMRDAPCSVAIFVDRGLGSLFKVNLRLLMVFFGGPDDREALALAWRMSKHEGIQLSVVRVNMLGEAAQVDLSPQAESRELFCAVMDCEKQREFDDEYVSSFRLKAVNNKDSISYSEKEVHSGEDIPLMMEELDKVGYDLYILGQGTGRNSLMLSDLLKWSDCPELGVIGDMVASNNFGSCSSLLVVQQYGFGGMVFENTTQNPCQLPKNDCESEDVYVEVEL* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2959 823 Pfam Sodium/hydrogen exchanger family 54 433 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Psa5g2959 823 Gene3D - 40 445 IPR038770 -
Psa5g2959 823 PANTHER CATION/H + ANTIPORTER 22 805 - -
Psa5g2959 823 PANTHER CATION/H+ EXCHANGER 3 22 805 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2959 Psa-Chr5 228484293 228486943 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2959 16 818 Antiporter Super Family AT2G13620 36.687 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2959 - - gmx:100802381 1107.82