Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2945 ATGGCCACCACCACAACCGCCGCCGTCACGTCACACTTTTTCGGCACCCATCTTAGAAAACCAGCCTCAAACATTGGAAGAATCCGCGCCTTTTTCAACATCGGCATCAAAAAGGCAGCACCAAAGAAAAAGGAAGTAAAGAAAGTGAGACAACCCGAAAGTGACGGACTAGTCTGGTTTCCCGGTGCACAGCCACCGGAATGGCTCGACGGAACCATGATCGGGGATCGTGGATTTGATCCATTGGGCTTTGCGAAGCCTGCTGAGTATCTGCAGTTTGACCTTGACTCGCTTGACCAGAACTTAGCTAAGAACCTTGCTGGTGACGTGATCGGGACTAGGGTGGAAGCTGGAGAGGTGAAACCGACGCCGTTTCAGCCGTACTCGGAGGTTTTTGGGATTGAGAGGTTTCGTGAGTGTGAGCTTATTCATGGAAGGTGGGCCATGCTTGGTGCTCTTGGTGCTTTGGCTGTTGAAGCTTTCACTGGTGTCGCATGGCAAGATGCTGGAAAGGTGGAGCTGGTGGAAGGGGCATCCTACTTTGGATTTTCTCTTCCTTTCTCATTGACTGCATTGATATGGATTGAAGTATTAGTAATCGGGTACATTGAGTTTCAAAGGAACGCCGAGCTTGACCCAGAGAAAAGGTTATACCCAGGTGGAAAGTTCTTTGATCCTCTTGGTTTGGCCAATGATCCTGAAGAGAAAGAAAGACTTCAACTGGCAGAGATTAAGCATTCTCGCTTGGCCATGGTGGTTTTCCTTGTCTTTGCAATTCAAGCTGCTGTTTCTGGAAAAGGACCTATTGGTTTCATTGCTACCTTCAACCAGTGA 834 0.4868 MATTTTAAVTSHFFGTHLRKPASNIGRIRAFFNIGIKKAAPKKKEVKKVRQPESDGLVWFPGAQPPEWLDGTMIGDRGFDPLGFAKPAEYLQFDLDSLDQNLAKNLAGDVIGTRVEAGEVKPTPFQPYSEVFGIERFRECELIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGASYFGFSLPFSLTALIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSRLAMVVFLVFAIQAAVSGKGPIGFIATFNQ* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2945 277 Gene3D Chlorophyll a/b binding protein domain 56 277 - -
Psa5g2945 277 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 276 IPR001344 GO:0009765|GO:0016020
Psa5g2945 277 Pfam Chlorophyll A-B binding protein 65 261 IPR022796 -
Psa5g2945 277 SUPERFAMILY Chlorophyll a-b binding protein 54 274 - -
Psa5g2945 277 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 1 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2945 Psa-Chr5 226731232 226733633 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2945 22 274 Chloroplast and Mitochondria Gene Families AT3G08940 70.751 3.57e-129 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2945 K08915 - gmx:100794604 444.506