Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2939 ATGGATCTTGTAAATTCTTCAGTAATATGCCAAAGTACTATTCAGACTCACAAGAGTGTGTGGCAGTTAGGCAATCCACTTTCTTCCCCCACTTCTCTTCTCTTCCTGCAGGTCGCTCTTATTACTATAGTCACACAATTCTTGGATATTTGTCTCAGACCACTAGGACAAACCTCTCTTGTTTCTTATATTCTTGGAGGATTGGTGTTTGGTCCATCAATGTTGGGGCACGGAGATATGTCCGTGACAAGAATGTTATTCCCTATGAAAGGTTCTCTAATACTCAACACAGTGGCAACTTTCTTCCTCAGTTTCTTCTACTTCTTATGTTGTGTAAAGATGGATACTGCAACAATGCTGAAAACAGAAAAACAAGCCATCACAATAGGTCTTTCGGTTTTCGTATTCACATTTCTAATCCCTCTTGGATTAGCCTTTGCATTGACCAAATTTGTTACCATGGACCAATCGCTCGTGGAAGCTCTCCCGTTGATAGCCATTTCGCAGAGCTTTACCGTATTCATCAGCATATCAATCCTTCTAACAGAGCTTAAAATCCTTAACACAAACGTCGGCCGTCTCACGTTATCATCCGCGATGTTTACGGATGTTTTCAGTTTCTCCATAACAATACTTATATTTGCAGTATTGCAGGTTACAACTACTCATAAGAGTATGCTGACACTAGCATGGATTCTTCTTTCAATAATCGGACTCTTGGTTTTTATCATATATGTACTGAGGCCGATTATAAAATGGTACATAGTCCGATTACACGGAAATCCAGTCGGCGAAATTTGCATTGTCAGTATCTTTCTATGCCAGCTTCTCACTTCATTTTTGAGCGAATTCATTGGACAGCATTATGTTATGGGAACCATATTTTTTGGCCTGGCTGTTCCTGAAGGGCCACCTTTAGGATCGACTTTGATATCAAAACTGGAAACGCTTACTTGTGGTTTTATGTATCCATTATACCTCGCTGTCAGTGGATTGGAGACTGATGTATTCAAAATCAACATTCACACTACTTGGATTGTATCTGTCGTAGTGATGGTCTCATTTTTCGTAAAGATCGTGGCTGTTATGTTGCCTGGTTATTATTACAATGTTCCCATGAAAGATTGTTTTGTGATTGGCCTTCTTCTCAATGGCAGAGGTATCGCCGAGCTTGCGTTATACAATGTCTGGAGGCAAGGCAAGCAACTAACAGGACAACATTTTTCTTTATTGGTGCTGACCCTTCTAGTGATAAATGCTATCATAGCACCATTGGTAAAATTCATATTTAATCCTTCAGACCAGTATCATTCAGGCAAAAGAAGTTCAATACAATATATAAAGCGAGACTCCGAGCTCCGAGTCATGGGATGCTTTTACAAGAATGAAAGCATCCCAACAATGCTCAACATCGTAGAAGCATCATGTGCAAGCAGAGAGAGCAATGTTATGTTTATAGCACTTCTCCTTGTAGAGATTCTTGGAAGATCAAGGCCTGTTCTCGTCGCTCACCAACCGCATGATACGCTTCGGACAACAAGTGGTTATTCAACTCCACTCGAGAAAGCATTGAGGCAATATACACAGTTCAATGAAGGGTGTGCTCATGTTGAATCATTCACATCCATTTCCGACTTCGACACAATCCACGAGGACGTCTGTCGAATATCCCTCGACAGAATAGCCAACATTTTGATCATGCCATTTCACAAAAGATGGGAGATAGACGGAGCGGTCGGGGCAAACAATAGAAGAATCCAAATGATAAACATTAAAGTCCTCGAAGGAGCGCCTTGTTCAGTCGGAATCCTCATCGACCGAGGTAGCTTAAGCGCTACTCCGTCGCTACTATTAGGCAAGTCAGCATACTATGTAGCAGTACTCTTCATTGGAGGTGCAGATGATGCAGAAGCACTAGCCTATGCTAGTAGAATGGTTAGACACGAGTGTGTGAATGTATCAGTTATCAGGTTCCTTATATTCGGAGAAGAGAATTCAAAAGATAGAAAACGTGACACTGATCTTGTAGACGAATATAGATATTATACTACCGGAAATAGAAGGTTTGCGATAACCGAAGAAGTAGTGAAAGATGGAATCGAGTTTTCTTCTATAATTAGAAGAATAATAGATTGTTTTGATTTAGTTATGGTAGGGAGGTCACATCCACAATCAGTATTGTTACATGGACATGATCAATGGAGTGAGTGTCCTGAGTTAGGTGTGATTGGTGATATGTTGGCTTCACAGGATTTTGTGACAAAGGCATCTGTGTTGGTTGTGCAACAACAAAGAATGGGAGGGAGATTCAGTAACCATAATGTTATGCCAAGTCCAAGGGATTATCCAGTAAGTACTGTTTCAATGGATGGATCACCAGGACATTCTTGTTCTATTTCAGTGGTTAAATCTGACATATAA 2421 0.4056 MDLVNSSVICQSTIQTHKSVWQLGNPLSSPTSLLFLQVALITIVTQFLDICLRPLGQTSLVSYILGGLVFGPSMLGHGDMSVTRMLFPMKGSLILNTVATFFLSFFYFLCCVKMDTATMLKTEKQAITIGLSVFVFTFLIPLGLAFALTKFVTMDQSLVEALPLIAISQSFTVFISISILLTELKILNTNVGRLTLSSAMFTDVFSFSITILIFAVLQVTTTHKSMLTLAWILLSIIGLLVFIIYVLRPIIKWYIVRLHGNPVGEICIVSIFLCQLLTSFLSEFIGQHYVMGTIFFGLAVPEGPPLGSTLISKLETLTCGFMYPLYLAVSGLETDVFKINIHTTWIVSVVVMVSFFVKIVAVMLPGYYYNVPMKDCFVIGLLLNGRGIAELALYNVWRQGKQLTGQHFSLLVLTLLVINAIIAPLVKFIFNPSDQYHSGKRSSIQYIKRDSELRVMGCFYKNESIPTMLNIVEASCASRESNVMFIALLLVEILGRSRPVLVAHQPHDTLRTTSGYSTPLEKALRQYTQFNEGCAHVESFTSISDFDTIHEDVCRISLDRIANILIMPFHKRWEIDGAVGANNRRIQMINIKVLEGAPCSVGILIDRGSLSATPSLLLGKSAYYVAVLFIGGADDAEALAYASRMVRHECVNVSVIRFLIFGEENSKDRKRDTDLVDEYRYYTTGNRRFAITEEVVKDGIEFSSIIRRIIDCFDLVMVGRSHPQSVLLHGHDQWSECPELGVIGDMLASQDFVTKASVLVVQQQRMGGRFSNHNVMPSPRDYPVSTVSMDGSPGHSCSISVVKSDI* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2939 806 Pfam Sodium/hydrogen exchanger family 40 426 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Psa5g2939 806 Gene3D - 32 438 IPR038770 -
Psa5g2939 806 PANTHER CATION/H + ANTIPORTER 7 776 - -
Psa5g2939 806 PANTHER CATION/H(+) ANTIPORTER 15-LIKE 7 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2939 Psa-Chr5 226338755 226341466 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2939 5 787 Antiporter Super Family AT2G13620 34.360 2.43e-144 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2939 - - gmx:100779700 966.837