Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2938 ATGGAAATTATAAATTCTACACTAATATGTTCAAGTCCTTATCGTAATTCTCACAAGAGTGTGTGGATGTTAGGCAACCCACTTGCTTCCCCCACTCCTCTTCTCTTTCTGCAGGTTTCACTTATTACTGTTGTTTCACAACTCGTGGATGCTTGTCTCAAACCACTAGGACAAACCACCCTTGTATCTCAGATTCTTGGAGGATTGGTATTTGGTCCATCAATGTTGGGGCACAAAAAGATGGTGACAAGAATCTTATTCCCTATGAAAGGTTCTTTAGTACTTAGCACAGTGGCAACTTTCTGCCTCAATTTCTTCTACTTCATATGTTGTGTAAAGATGGATACTGCAACAATGCTGAAAACAGAAAAACAAGCCATCACAATTGGTATTTCTGTATTCACGTTCGCATTTGCAATCCCTCTTGGGTTATCCTTTGCATTCACCAGTTTTGTTTCCATGGACAAAACCCTCGCGGCTGCTCTCCCTTTAATAGCCATCTCGCAAAGCTTTACTGTATTCATCAGCATATCAGTCCTTCTAACAGAGCTTAAAATCCTAAACACCAATGTCGGCCGTCTAGCATTATCATCGGCGATGTTTACCGATGTTGTTAGTGTCCCTATGGTAACACTTATTTTTGCAGTAATGCAGGTTAAAACTTCTCATAAGAATATGGTTACACTGCTATGGATCCTTCTATCCATAGGTGCACTCTTGGTTGTTATCTTCTATGTAATGAGGCCGACTATGATATGGTATGTAGGCCGGTTAAATGGAAAACCGATTGACGAATTTTGTATTGTCTGTATCATTCTGTGTGTTCTCTTCACTGCATTTTGCAGTGAGTTCATTGGACAGCACTATTCTATGGGACCGATATTTTTAGGCTTGGCTGTTCCTGAGGGACCGCCTTTAGGATCGACTTTGATATCGAAAATGGAAACACTTTCTGTTGGGTTTTTGTATCCATTATACCTTGCTGTCAGTGGATTGCAGACTGATATATTCAAAATCAACTTTCAGGCTACTTGGATTATAACTGTCATAGTGGTAGTCGCTTTTGTCGCAAAGATCATTGCTGTTATTTTGCCAGGTTATTATTACAAAGTTCCCATGAAAGATTGTGTTGTGATTGGGCTAGTTCTCAATGGCAGAGGTATTGCTGAGCTCTCCATGTACAATTTAATGAAGAGCGGCCAGCTACTAACAGGACAACTGTTCTCTTTTATGGTGCTGACCCTTATATTGATAAATGGTATCATAGCACCACTGGTAAAATTGACATATAATTCTTCAGCCGAGTATCGTTCAGGAAAAAGAATTTCAATACAACATACAAAGCAAGATTCCGAGCTCCGAATCATGGTATGCTTTAACAAGAATGAAGACATCCCAACAATGTTCAACATCATAGAAGCATCGTGTGCAAGCAGAGAGAGCAATGTTGAAGTTATAGCAATTCACCTTGTAGAGCTTCTTGGAAGATCAAGGCCTCTTCTCCTTGCTCACCAACCGCATGACACGCTTCCGGTAACCAATTGTGATTCAACTCAACTCGACAATGCATTGAAGCAATATACACAGCTCAATGAAGGGTGTGCACATGTTCAATCATTCACATCAATCTGCGACTTTGACACAATCCATGAGGATGTCTGCGGAATATCCCTCGACAGAAGAGCCAACATTTTGATCATGCCATTCCACAAAAGATGGGAGATAGATGGAACGGTCGAGGTAAAGAATAGAGGAGTCCAAACAATAAACATTAAAGTCCTCGAAAGAGCCCCTTGTTCAGTCGGAATCCTCATCGACCGAGCTATCTTAAGCGGTTCTCCGTCACTTTTAATAGGTAAATCAGCATACTATGTAGGAGTACTCTTCATTGGCGGTGCAGATGATGCTGAAGCACTAGCCTATGCTAGCAGAATGGCTAGACACGAGTGTGTGAATGTATCTGTTATTCGGTTCCTTGTTTTTGGAGAAGAGAATTCAAAAGATAGAAAATATGAAACTAATCTTGTAGATGAATATAGATATTGTAATAACAGAAATAGTAGGTTTGAGATAACCGAAGAAGTAGTGAAAGATGGAATAGAATTTTCTACGAGTGTAAGAGGAATGGTAGATTGTTTTGATTTAGTTATGGTAGGGAAGTCACATCCACAATCAGTATTGTTACATGGACATGATCAATGGAGTGAGTGTCCAGAGTTAGGTGTGATTGGTGATATGTTGGCTTCAAAGGATTTTGTGAGAAAGGCATCTGTGTTGGTTGTGCAACAACAAAGAATGGGAGGGAGATTCATTAATGCTATGCCAAGTCAGATTGTACATAACGTTCCAATGAATGAACCACCAATACCTTCTTGTACTATTTCAATAGATGAAAATGGCAGAATGTAG 2409 0.3993 MEIINSTLICSSPYRNSHKSVWMLGNPLASPTPLLFLQVSLITVVSQLVDACLKPLGQTTLVSQILGGLVFGPSMLGHKKMVTRILFPMKGSLVLSTVATFCLNFFYFICCVKMDTATMLKTEKQAITIGISVFTFAFAIPLGLSFAFTSFVSMDKTLAAALPLIAISQSFTVFISISVLLTELKILNTNVGRLALSSAMFTDVVSVPMVTLIFAVMQVKTSHKNMVTLLWILLSIGALLVVIFYVMRPTMIWYVGRLNGKPIDEFCIVCIILCVLFTAFCSEFIGQHYSMGPIFLGLAVPEGPPLGSTLISKMETLSVGFLYPLYLAVSGLQTDIFKINFQATWIITVIVVVAFVAKIIAVILPGYYYKVPMKDCVVIGLVLNGRGIAELSMYNLMKSGQLLTGQLFSFMVLTLILINGIIAPLVKLTYNSSAEYRSGKRISIQHTKQDSELRIMVCFNKNEDIPTMFNIIEASCASRESNVEVIAIHLVELLGRSRPLLLAHQPHDTLPVTNCDSTQLDNALKQYTQLNEGCAHVQSFTSICDFDTIHEDVCGISLDRRANILIMPFHKRWEIDGTVEVKNRGVQTINIKVLERAPCSVGILIDRAILSGSPSLLIGKSAYYVGVLFIGGADDAEALAYASRMARHECVNVSVIRFLVFGEENSKDRKYETNLVDEYRYCNNRNSRFEITEEVVKDGIEFSTSVRGMVDCFDLVMVGKSHPQSVLLHGHDQWSECPELGVIGDMLASKDFVRKASVLVVQQQRMGGRFINAMPSQIVHNVPMNEPPIPSCTISIDENGRM* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2938 802 Pfam Sodium/hydrogen exchanger family 42 426 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Psa5g2938 802 Gene3D - 34 438 IPR038770 -
Psa5g2938 802 PANTHER CATION/H(+) ANTIPORTER 15-LIKE 6 776 - -
Psa5g2938 802 PANTHER CATION/H + ANTIPORTER 6 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2938 Psa-Chr5 226330104 226337484 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2938 5 763 Antiporter Super Family AT2G13620 35.451 4.27e-155 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2938 - - gmx:100779700 971.459