Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2906 TTTTTTCCCCATCACTCCATCCGTTTGGGAAGTGGAAGAAGAAGGTGAAGGCTCTGGAGCTGTTAAAGAAGAGACTGCCCAGACTGTTGTCGTCATTGAGCATTGTGTTCCCGAGGTACTTCGTCCATTGTATGAATCATCAACAATGCTGGCTCAGAAGACAACAATGGTGGCCCTACGTCACCTAAGGCAAATTTCACATGAAGTTTCTCAGTCTAATGTCACTGGGTGGGGCCGATGGACAGCCGCACTCCGAGCACTTGGCCAAAGACTGAGCCGGGGTTTCAATGAGGCACTGAATGAGTTTACAGATGAGGGATGGTCAATGATTGGCAATCATGGTGTTGATGATGTTACAATTCTAGTGAATTCATCACCTAACAAATTAATGGGTCTGAATCTTTCATTTGCCAATGGATTTCCATCTATCAGTAATGCAGTCCTATGTGCTAAAGCTTCAATGCTATTACAAATGTACCCCGACCATTCTACTGAGGTTTTTGCGGAACATAGATCAGAATGGGCAGACAACAACATGGATGCTTACTCAGCTGTGCCATCAAGTAAAGCTGTTTCAAAATTATGTGCCAAGTTTCTACACCAGCAGGTGCTTAGGCATGAAGCTTACTTAGCTGGAGAGAATTAG 646 0.4443 FFPITPSVWEVEEEGEGSGAVKEETAQTVVVIEHCVPEVLRPLYESSTMLAQKTTMVALRHLRQISHEVSQSNVTGWGRWTAALRALGQRLSRGFNEALNEFTDEGWSMIGNHGVDDVTILVNSSPNKLMGLNLSFANGFPSISNAVLCAKASMLLQMYPDHSTEVFAEHRSEWADNNMDAYSAVPSSKAVSKLCAKFLHQQVLRHEAYLAGEN* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2906 214 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 30 186 IPR044830 GO:0003700
Psa5g2906 214 PANTHER CLASS III HD-ZIP PROTEIN CNA1 30 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2906 Psa-Chr5 222615536 222618138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2906 32 184 Homeobox Transcription Factor Family AT1G52150 71.338 1.98e-66 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2906 K09338 - gmx:100819365 248.054