Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2888 ATGAGTTTTGTTTTTCGAGGAGCAAGAGGTGATATAGAAAATGGGTTTCCAGGATTTATGCCCGAGAGGCGTGCATTGCGTGTTCATGCAGCACGTCCTAGTAATTCCAACTCACTCACTTTTCTCGTAACAGTTCTCCTGTTATTCATGATACTGAACTCCCACCAGATGTCACCAAATTTTCTGCTCTGGCTAGTGCTTGGTGTTTTTTTGATGGCTACAATGCTAAGGATGTATGCGACATGTCAACAGCTTCAAGCCCAGGCCCAAGCTCATGCAGCAGCAGCCAGTGGCCTTCTTGGCCACACAGAACTACGGTTGCATATGCCTCCATCGATAGCACTTGCAAGCCGAGGGCGTCTGCAGGGTCTCAGACTTCAGCTGGCACTTCTTGATCGGGAGTTTGATGATCTAGATTATGAAACTTTAAGAGCTCTGGATTCGGATAATGTTTCTACTGCACCTTCTATGACTGAAGAAGAGATAAATGCTCTTCCAGTTCACAAATACAAGGTTTCTGTTCCCCAAAAAAGTAATTCCTTAGTGCCACAAGCATCGCCATCCACTTCCGCTGAGAAAACGCAGGATAATTCAAATGCGGCTGGAAACTCAAAAGCCTCAGATGATGATCTCACCTGCAGTGTATGCTTGGAGCAGGTTAATGTTGGAGATGACTTCCGTATGCATTTGCCCTGCCGTGCATCGCGTGTGTTTAGCTGGTCTGCTTGTTACATTTTAGCAATAGTTTGTTTTCTATTTTTGTTTTGA 768 0.4505 MSFVFRGARGDIENGFPGFMPERRALRVHAARPSNSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATMLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALASRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVSTAPSMTEEEINALPVHKYKVSVPQKSNSLVPQASPSTSAEKTQDNSNAAGNSKASDDDLTCSVCLEQVNVGDDFRMHLPCRASRVFSWSACYILAIVCFLFLF* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2888 255 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SDIR1 1 232 - -
Psa5g2888 255 MobiDBLite consensus disorder prediction 181 205 - -
Psa5g2888 255 PANTHER TARGET OF ERK KINASE MPK-1 1 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2888 Psa-Chr5 219734837 219737238 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2888 1 232 C3H Transcription Factor Family AT3G55530 78.541 5.23e-116 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2888 K16283 - gmx:100777936 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2888 5 219734837 219737238 Psa5g2888 5 219734837 219737238 ECH