Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2883 ATGGCAAAAACACCTCTGTTTCTTCTCTGCATATTGACCCTTCTAGCCTCAAATTCCATACAATCTTATGCTCAGCAACATGAGTTTTTCTTTGCTGGATTCAATGAAGATACCACAAACATAACCTTAAACGGGGGTGCAGTGATTGAACACAAGGGCACACTTCGTTTAACAAACGACACTGAAAGAGTAATTGGTCATGCTTTTTATTCAACCCCAATTAACTTCAAAAACAAAAACAACTCAACCAACCACAAAGTTTTCTCCTTTTCAACTTCCTTTGCTTTTGCAATAATCCCTCAATACCCAAAACTAGGAGGCCATGGCTTCGCATTCACCGTTTCTCCTTCCAACAAACTCTCCAATGGCTATCCTAGTCAGTACTTAGGCCTTCTCAACCCAAAAGATTTAGGCAACTTTTCGAACCACCTATTCGCAGTTGAATTCGACACTGTACAAGATTTCGAATTCAATGACATCAATGACAACCATGTTGGTATCAACCTGAACAACATGGTATCAAACAAATCAGTCAAAGCATGTTTTTTTACTGATGGGTCAACGAGTAAACAAGTTCAAGACCTCAATTTGAAGAGTGGTAGTGTGATTCAAGCATGGATCGATTACGATTCCTCCATAAATCAACTTGAAGTTAGACTCTCTCCATCTTCATCAAAACCCACTTCACCAATTTTATCATACCAAGTAGATCTAACCCCAATTTTCAAAGAAACTATGTATGTTGGGTTTTCTTCTTCAACGGGGTTACTCTCTAGCTCACACTATATATTAGGTTGGAGCTTCAAAATCAATGGAGAATCCAAAACACTGTCTTTGAAAAAACTTCCTTCACTCTCTTCACATTCCAATAAAACTACTCAAACTCGAAAAGCCATAATCTTGGGTCTCTCTATTTCATTTGTGATTCTAGTAGTTTTAACAACTGGTTTATCTGTTTACTTTAAGATGAAAAACTATGATGTTATAGAAGCTTGGGAACTCGAAGTGGGTCCACATAGATTCCCTTACAAAGAACTGAATCAAGCAACAGGAGGATTCAAGGACAAGAACCTTATTGGTTTCGGAGGTTTTGGTCGAGTTTACAAAGGGGTGTTTAGGATCATAAAAGGTGTGGCTTTTGGGCTAGTTTATCTGCATGAGGAATGTGAACAGACGGTGATTCATAGAGATGTGAAAGCTGGGAATGTGCTTTTGGATTGTGAGATGAATGCGAGGTTGGGTGATTTTGGTTTGGCGAAGCTTTATGATCGTGGTGAGAATCCGAATACGACAAGGGTGGTTGGAACGTTGGGGTATTTAGCGCCGGAGTTAACGAGAACGGGGAAGCCGACAACGAGTTCTGATGTGTTTGCGTTTGGGGCTTTGTTGTTGGAGGTGGTTTGTGGGAGGAGGCCTATTGAGGTGAAAGCGTTGCCGGAGGAGCTTGTTTTGGTGGATTGGGTTTGGGATAGGTGGAGGTTAGGGGCGGTGAAGGAGGTTGTGGATTGTAAGATGGGTGGGGTTTATGATGAGGTGGAGGTTTTGTTGGTGGTTAAGGTGGGTTTGATGTGTTCTGATGAGTCGCCGGAGAGGAGGCCGACGATGAGGCAGGTGGTTAGATACTTAGAGAGGGAAGTGAAGCTGCCGGAGCTGGATGGTTTTGGGGTGAAAAAGAAGGATTTTTTGTATTCGACGGGGTCGGGTTTTGGAAGTGGTAATACGTGGTCGTCGGTCGGTGATGACGTGGACGGTGGGTATGTTTCATCTTTTACACTTTCCGGTGGCCGGTAG 1791 0.4255 MAKTPLFLLCILTLLASNSIQSYAQQHEFFFAGFNEDTTNITLNGGAVIEHKGTLRLTNDTERVIGHAFYSTPINFKNKNNSTNHKVFSFSTSFAFAIIPQYPKLGGHGFAFTVSPSNKLSNGYPSQYLGLLNPKDLGNFSNHLFAVEFDTVQDFEFNDINDNHVGINLNNMVSNKSVKACFFTDGSTSKQVQDLNLKSGSVIQAWIDYDSSINQLEVRLSPSSSKPTSPILSYQVDLTPIFKETMYVGFSSSTGLLSSSHYILGWSFKINGESKTLSLKKLPSLSSHSNKTTQTRKAIILGLSISFVILVVLTTGLSVYFKMKNYDVIEAWELEVGPHRFPYKELNQATGGFKDKNLIGFGGFGRVYKGVFRIIKGVAFGLVYLHEECEQTVIHRDVKAGNVLLDCEMNARLGDFGLAKLYDRGENPNTTRVVGTLGYLAPELTRTGKPTTSSDVFAFGALLLEVVCGRRPIEVKALPEELVLVDWVWDRWRLGAVKEVVDCKMGGVYDEVEVLLVVKVGLMCSDESPERRPTMRQVVRYLEREVKLPELDGFGVKKKDFLYSTGSGFGSGNTWSSVGDDVDGGYVSSFTLSGGR* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2883 596 Pfam Protein kinase domain 374 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2883 596 PANTHER - 4 371 - -
Psa5g2883 596 PANTHER - 372 596 - -
Psa5g2883 596 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE IV.2-LIKE PROTEIN 372 596 - -
Psa5g2883 596 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE IV.2-LIKE PROTEIN 4 371 - -
Psa5g2883 596 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 285 IPR013320 -
Psa5g2883 596 SMART serkin_6 353 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2883 596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 393 405 IPR008271 GO:0004672|GO:0006468
Psa5g2883 596 ProSiteProfiles Protein kinase domain profile. 242 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2883 596 CDD lectin_legume_LecRK_Arcelin_ConA 28 272 IPR001220 GO:0030246
Psa5g2883 596 Gene3D - 24 271 - -
Psa5g2883 596 Pfam Legume lectin domain 27 282 IPR001220 GO:0030246
Psa5g2883 596 SUPERFAMILY Protein kinase-like (PK-like) 335 544 IPR011009 -
Psa5g2883 596 Gene3D Transferase(Phosphotransferase) domain 1 368 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2883 Psa-Chr5 219333709 219335748 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2883 368 567 Receptor kinase-like Gene Family AT3G55550 65.000 1.14e-84 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Psa5g2883 Lectin_legB 1e-75 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2883 - - aip:107621816 552.747