Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2864 ATGGACACTCCTCATTCCCCTTCTTCCTGTTCCTCTTCCTCCTCCTCCTCCTATTCATGGGAAGGACACGCTGCCGACACAATCAGTTTAGAGCCAGAAGAGCCGCAAACGCCGATAGCCGTCCGGCGTGCTCTTCAGCTTTTGAAATCCGGCTTGCCGGAGTTACGTCTCCAAGCCGCTCGCGACATCCGGAAACTCACGAAAACCTCGCAGCGGTGTCGGCGTCAGCTTTCTGAATCTGTCGGTCCACTCGTTTCTATGCTCCGAGTCGACTCGGCCGAGTCACATGAACCAGCGCTTCTCGCTTTGCTTAATCTCGCCGTCAAAGATGAAAAGAATAAAATCAAGATTGTGGAGGCCGGAGCATTAGAACCAATACTTAGTTTCCTCAAGTCACAAAATCCAAATCTTCAGGCATCTGCAACCGCGGCTTTGCTCACACTATCTGCTTCTTCAACCAACAAACCAATTATTAGTGCTTCTGGCGCTATTCCCCTTCTTGTGGAGATTCTTAGAGACGGGAGCCCACAGGCGAAAGCTGATGCAGTAATGGCTCTCTCTAATTTATCAACATACCCTAATAATCTTAGCATTATTCTTGAAACAAATCCAATCCCTTTCATAGTTGATATCCTCAAAACTTGCAAAAAGTCCTCCAAAACAGCTGAAAAATGCTGTGCTTTGATAGAAACTTTAGTGGATTATGATCAATGCAGAACTGTCTTGACATCTGAAGAAGGTGGGATTCTTGCAGTTGTGGAGGTTCTCGAAAACGGAACTCTCCAAAGTAGGGAGCATGCCGTTGGAACACTATTGACACTGTGCCAAAGCGATCGATGTAAATACAGGGAACCGATTCTTAGAGAAGGTGTCATTCCAGGACTACTTGAGCTCACTGTTCAAGGAACACCTAAGTCTCAGATAAAAGCGCGCACCCTTTTGCAACTACTAAGAGAATCTCCTTATCCAAGATCTGAAATTCAACCCGACACTCTCGAGAATATAGTATGCAACATCATCTCTCAGATTGACGGGGATGATCAATCTGGTAAAGCAAAGAAGATGCTGGCTGAGATGGTTCAAGTCAGCATGGAACAGAGTCTGCGACATTTACAGCAAAGGGCACTCGTGTGCACCCCAAGTGATCTCCCCATAGCTGGCGCTTCTGAAGTTTCTTTTAAGTAA 1185 0.4641 MDTPHSPSSCSSSSSSSYSWEGHAADTISLEPEEPQTPIAVRRALQLLKSGLPELRLQAARDIRKLTKTSQRCRRQLSESVGPLVSMLRVDSAESHEPALLALLNLAVKDEKNKIKIVEAGALEPILSFLKSQNPNLQASATAALLTLSASSTNKPIISASGAIPLLVEILRDGSPQAKADAVMALSNLSTYPNNLSIILETNPIPFIVDILKTCKKSSKTAEKCCALIETLVDYDQCRTVLTSEEGGILAVVEVLENGTLQSREHAVGTLLTLCQSDRCKYREPILREGVIPGLLELTVQGTPKSQIKARTLLQLLRESPYPRSEIQPDTLENIVCNIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPSDLPIAGASEVSFK* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2864 394 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 25 378 - -
Psa5g2864 394 PANTHER U BOX DOMAIN-CONTAINING 25 378 - -
Psa5g2864 394 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 162 204 IPR000225 GO:0005515
Psa5g2864 394 SUPERFAMILY ARM repeat 40 345 IPR016024 -
Psa5g2864 394 SMART arm_5 234 276 IPR000225 GO:0005515
Psa5g2864 394 SMART arm_5 69 108 IPR000225 GO:0005515
Psa5g2864 394 SMART arm_5 110 150 IPR000225 GO:0005515
Psa5g2864 394 SMART arm_5 151 191 IPR000225 GO:0005515
Psa5g2864 394 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 121 163 IPR000225 GO:0005515
Psa5g2864 394 Gene3D - 23 377 IPR011989 -
Psa5g2864 394 MobiDBLite consensus disorder prediction 1 33 - -
Psa5g2864 394 MobiDBLite consensus disorder prediction 1 23 - -
Psa5g2864 394 Pfam Armadillo/beta-catenin-like repeat 111 149 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2864 Psa-Chr5 217971896 217975705 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2864 41 318 U-box Gene Family AT2G23140 32.143 5.68e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2864 - - gmx:100809684 637.491