Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2828 ATGGTCAAAACAAAAACGTTCCTCTCCCTTTTATTCTTCTTAATTTTCATTCTCCATTCTCTTTCCTTCTCCACAGACACATTCATCTACGGTGGTTGCACACAACAGACATTCACCTCAACCTCACCCTACGAGTTCAACCTCAACTCACTCCTCACTTCACTAGTTAACTCAGCAACCTACACATCCTACAACAACTTCACCATCGTCGCTTCAAATCCCAACGACATCGTTTACGGTCTCTACCAATGCCGCGGCGACCTCTCCATGCCAGACTGCGCCTCCTGCGTTTCACGCGCTGTCTCACGCGCCGGTGACATATGTTCGGTCACGCGTGGGGGCGTAGTGCAGCTAGAAGGATGTTACGTGAAATATGATAATGTTAAGTTTTTGGGCGTGGTGGATAAAACGGTGGTGTTGAAAAAATGTGGGTCTTCAATCGGGTATGACCCGAGTACCCGAGATGCTGTATTGGCTGGGTTGGTGGGTTCAGGTGGGTATTTTCGGGCTGGTGGGTCGGGTCAGCTGAAAGGAATGGTGCAGTGTATTGGGGATTTGAGTTTTTTGGAGTGTCAGGATTGTGTTTCGGAGGCGATCCAACGGCTGAGAAGTGACTGTCCAGCGGCGGATTACGGAGATATGTTTTTAGCCAAGTGTTATGCGAGGTACTCTACTGGTGGTGCTGGTGGGGGCCATGCTTACTCCAAGTCTCATGGTAAATCAGACAATGATAGTGAGAAGACATTTGCCATAATTATTGGATTAATAGCAGCGGTAGCAATACTTATAATTTTCCTGGCTTTCTTGAGAAGGATTTGTGAGGGACACCACGGTAAATAA 840 0.475 MVKTKTFLSLLFFLIFILHSLSFSTDTFIYGGCTQQTFTSTSPYEFNLNSLLTSLVNSATYTSYNNFTIVASNPNDIVYGLYQCRGDLSMPDCASCVSRAVSRAGDICSVTRGGVVQLEGCYVKYDNVKFLGVVDKTVVLKKCGSSIGYDPSTRDAVLAGLVGSGGYFRAGGSGQLKGMVQCIGDLSFLECQDCVSEAIQRLRSDCPAADYGDMFLAKCYARYSTGGAGGGHAYSKSHGKSDNDSEKTFAIIIGLIAAVAILIIFLAFLRRICEGHHGK* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2828 279 Gene3D - 25 130 IPR038408 -
Psa5g2828 279 Gene3D - 153 226 IPR038408 -
Psa5g2828 279 ProSiteProfiles Gnk2-homologous domain profile. 131 228 IPR002902 -
Psa5g2828 279 ProSiteProfiles Gnk2-homologous domain profile. 26 130 IPR002902 -
Psa5g2828 279 Pfam Salt stress response/antifungal 33 127 IPR002902 -
Psa5g2828 279 Pfam Salt stress response/antifungal 172 225 IPR002902 -
Psa5g2828 279 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 9 274 - -
Psa5g2828 279 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 9 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2828 Psa-Chr5 214231662 214234117 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2828 8 224 Pollen Coat Proteome AT4G20670 24.583 6.35e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2828 - - gmx:100811615 360.533