Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2761 ATGGCTAAAAACAACACTATACACCAAATCCTATTACTCTTCTCATTCCTCTCTCTTCTTTTTTCCATTCATGCCAAACTTCACCTCCACCCTTCCGACGCAAAAGCCCTCACAACTCTCCAAAACAACCTCGGACTCAAAACCAACACCACCAACCACCCGTGTAACACGGAGGGCGTGTTCTGTGAAAGACGACTCACCAACAACGAAAGCTATTCCCTCCGAGTCACAAAACTCGTTTTCAACTCAAAGAAACTCAGAGGCACGCTTTCACCAACCATTGGAAAATTCACAGAACTCAAAGAACTCTCTCTTTCACACAACAAACTCGTTGACCGAATCCCTTCCTCCATAGTTGACTGCAGAAAGCTTGAGATTCTTAATCTTGGAGATAATCTTTTCTCCGGTGAAGTTCCTTCTGAATTCTCTTCACTCATTCGTCTTCGTTTTCTTGATATATCCGAAAATAAACTCTCCGGAAACTTGAATTTTCTTCGCTATTTTCCCAATCTAGAAACTCTTTCTGTTGCAAACAATCACTTTACAGGAAGAGTTCCGGTTTCGCTTCGGTCTTTTCGTAACCTCAGACAGTTTAACTTCTCTGGTAACCGTTTTCTCGAAGGCCTGCCGTTGAATCAGAAGCTTGTAGAATATGATAATACTAATACCAACACCGCGACTAAACGGTATATCCTTGCCGAGAATGAGAATTCGAATTCAAATCGAACGAGGATTCGTTCGCATTCGAATTCTCATTCTCCTGCTCCAGCACCTGGTCCTGCAGCAGTGGATCCTCACCACAAGCATAAGAAGAACAGGAGAAAGTTAACTGGATGGATTCTTGGGTTTGTGGCCGGAGCATTCGCTGGGATACTCTCCGGTTTCGTGTTTTCGTTGTTGTTTAAGTTGGCTTTGATTGTGATTAAAGGAAAAGGAAAAGGTTCTGGTCCTGCAATTTATAGTTCTTTGATTAAAAAAGCTGAGGATTTAGCTTTCTTGGAGAAAGAAGACGGTTTAGCTTCGTTGGAACTTATCGGAAGAGGTGGATGCGGCGAGGTTTACAAGGCGGAACTACCCGGGAGTAATGGTAAAATGATTGCCATCAAGAAGATTATTCAACCATCTAAGGATGCAGCAGAGTTGGCTGAAGAAGATAGTAAGCTTCTGCATAAGAAGATGCGACAAATTAAGTCGGAGATTGATACTGTCGGTCAGATTCGTCATCGCAATCTTTTGCCTCTTTTGGCTCATGTTTCTAGACCTGATTGTCATTACCTTGTGTATGAGTTTATGAAGAATGGAAGTTTGCAGGATATGTTGCACAAAGTTGAAATAGGCGAAGCGGAGTTGGATTGGTTGACAAGGCATAGGATTGCACTTGGTATCGCGGAAGGGCTTGAATACCTTCACACGAGCCATAGTCCTCGCATAATTCATCGCGATCTCAAGCCTGCAAACATTCTTCTTGACGATGATATGGAAGCTAGGATTGCGGATTTTGGACTCGCGAAAGCAATGCCTGACGCGCAGACGCATATCAGTACTTCGAACGTGGCTGGCACGGTGGGATATATCGCGCCTGAGTATCATCAGATATTCAAATTCAGTGACAAGTGTGACATATATAGCTTTGGTGTTATGCTTGGTGTTTTGGTGATAGGAAAGCTTCCTTCTGATGATTTTTTTCAGAATACTGATGAGATGAGTTTGGTCAAGTGGATGAGGAATGTGATGACTTCGGAAAATCCTAAGGACGCCATCGATGCAAAGCTCATCGGTAATGGTTATGAGGAACAAATGCTTCTGGTTTTGAAGATTGCTTGCTTTTGCACCATGGATAATCCTAAGGAGAGGCCTGATAGTAAGAATGTCAGGATCATGTTGTTCCAAATCAAGCACTAG 1902 0.4295 MAKNNTIHQILLLFSFLSLLFSIHAKLHLHPSDAKALTTLQNNLGLKTNTTNHPCNTEGVFCERRLTNNESYSLRVTKLVFNSKKLRGTLSPTIGKFTELKELSLSHNKLVDRIPSSIVDCRKLEILNLGDNLFSGEVPSEFSSLIRLRFLDISENKLSGNLNFLRYFPNLETLSVANNHFTGRVPVSLRSFRNLRQFNFSGNRFLEGLPLNQKLVEYDNTNTNTATKRYILAENENSNSNRTRIRSHSNSHSPAPAPGPAAVDPHHKHKKNRRKLTGWILGFVAGAFAGILSGFVFSLLFKLALIVIKGKGKGSGPAIYSSLIKKAEDLAFLEKEDGLASLELIGRGGCGEVYKAELPGSNGKMIAIKKIIQPSKDAAELAEEDSKLLHKKMRQIKSEIDTVGQIRHRNLLPLLAHVSRPDCHYLVYEFMKNGSLQDMLHKVEIGEAELDWLTRHRIALGIAEGLEYLHTSHSPRIIHRDLKPANILLDDDMEARIADFGLAKAMPDAQTHISTSNVAGTVGYIAPEYHQIFKFSDKCDIYSFGVMLGVLVIGKLPSDDFFQNTDEMSLVKWMRNVMTSENPKDAIDAKLIGNGYEEQMLLVLKIACFCTMDNPKERPDSKNVRIMLFQIKH* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2761 633 Pfam Protein kinase domain 342 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2761 633 Gene3D Ribonuclease Inhibitor 32 143 IPR032675 -
Psa5g2761 633 Pfam Leucine rich repeat 99 158 IPR001611 GO:0005515
Psa5g2761 633 ProSiteProfiles Protein kinase domain profile. 339 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2761 633 MobiDBLite consensus disorder prediction 237 269 - -
Psa5g2761 633 MobiDBLite consensus disorder prediction 237 254 - -
Psa5g2761 633 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 9 633 - -
Psa5g2761 633 Gene3D Transferase(Phosphotransferase) domain 1 431 632 - -
Psa5g2761 633 SUPERFAMILY L domain-like 52 208 - -
Psa5g2761 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Psa5g2761 633 Gene3D Ribonuclease Inhibitor 144 253 IPR032675 -
Psa5g2761 633 SMART serkin_6 339 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2761 633 Gene3D Phosphorylase Kinase; domain 1 328 430 - -
Psa5g2761 633 Coils Coil 379 399 - -
Psa5g2761 633 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE KINASE 9 633 - -
Psa5g2761 633 SUPERFAMILY Protein kinase-like (PK-like) 333 631 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2761 Psa-Chr5 209555165 209557696 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2761 11 633 Receptor kinase-like Gene Family AT2G31880 62.162 0.0 776
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Psa5g2761 Pkinase 5.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2761 - - gmx:100811980 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2761 5 209555165 209557696 Psa5g2761 5 209555165 209557696 ECH