Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2734 ATGTTAAGAATGTTCCAAGATCTAAATACCACCCTTTTCATGTTTCTTTCCTTCATCATCAGCATACTGCTGGTGTTCAAGTTCACAAGAATAAACAAATTAAACCTACCTCCATCCCCACCTGGATTGCCAATAATTGGCAACTACCTTCAGCTAGGAACTCTACCTCATCGTTCTTTTCATTCCCTATCACAAATGTATGGTCCTCTGATGCTGTTGCAGTTTGGCCAGCTTCGTGTGTTGGTGGTTTCCTCAGTAGATATGGCCAAAGAAGTCATGCATACACATGATACCATTTTTGCGAGCCGGCCGAATCTGACATCAACAAAAGCTTTACTCTATGGATGCAAGGACATTGCGTTTGCATCTTATGGTGATACATGGAGACAGAAAAAGAAACTGTGTGTGATTGAATTGTTGAGTCAGAAAAGGGTGCAATCAGTACAGTTTATTAGAGAAGAGGAAGCGATGGCATTGGTTGAAAAGATACGTAAAGCATTGAGTTTGAGTGAAGGTTGTTGCACTGTGAACCTTAGTGAGATGTTGATAGCAACTGCAAACAACATAATCTGTAGGTGTATGTTTGGAAAAAAATACGACGCTGATGGTTGCAGATTCGGAGAACTTGGCAGGCAGATAATGGTTCAAATTTCAGATTTTAGTATTGGAGATCTGTTCCCTTCGTTGGGTTGGGTTGATGTTCTTACTGGCCAAATTAAAAAATTCAAAGCTACTTTTGAAGAAATGGACGATTTCTTTGATCAAATAATTGTAGGACATAGGATGTCCAGGAGAGACCCCAACAAGAAAGATTTCCTCGACATTCTGCTTCAACTTCAGGCTGATGGTCTTTCAGAGTTCGACCTCACAGAAAGTGACTTAAAAGCAATCTTAATGGACATGTTTTTAGGAGGAAGTGACACAACTTCAACAACAGTTGAATGGACTATGACAGAACTTGTAAGAAATCCAGCCATAATGAAGAAAGCACAGGAGGAAGTAAGGAGAATTGTAGGGAAAAAAACAAAAATAGAGGACAGTGATGTCGATCAAATGGACTACATGAAATGTGTAATCAAAGAAACGTTGAGGATGCATCCAGCTGCTCCTCTTCTGGCTCCTAGAGAAACAACATCTAGTGTTAAACTTGGAGGGTATGAGATTCCTGATAAAACATTGGTATATATCAATGCATGGGCAATCCAGAGGGATCCTGAATTTTGGGAAATGCCAGAAGAGTTTCTACCTGAGAGATTTGAAAATAACAAGGTTAATTTCAATGGTCAAGACTTCCAATTTATCCCGTTTGGTTCTGGGAGAAGAAAATGTCCTGGTATTGCGTTTGGGCTTGCTTCCACCGAGCATATGGTTGCTAATCTTTTGTATTGGTTTGACTGGAAGCTACCTACAAATGACGATGCATCTCTTCAAGAAATAGACATGACTGAGAAATTTGGGCTCACTGTCAACAAGAAAGTTCCTCTTCGCCTCCAACCAATACCATACAATAATTTCATAGAATAA 1524 0.3976 MLRMFQDLNTTLFMFLSFIISILLVFKFTRINKLNLPPSPPGLPIIGNYLQLGTLPHRSFHSLSQMYGPLMLLQFGQLRVLVVSSVDMAKEVMHTHDTIFASRPNLTSTKALLYGCKDIAFASYGDTWRQKKKLCVIELLSQKRVQSVQFIREEEAMALVEKIRKALSLSEGCCTVNLSEMLIATANNIICRCMFGKKYDADGCRFGELGRQIMVQISDFSIGDLFPSLGWVDVLTGQIKKFKATFEEMDDFFDQIIVGHRMSRRDPNKKDFLDILLQLQADGLSEFDLTESDLKAILMDMFLGGSDTTSTTVEWTMTELVRNPAIMKKAQEEVRRIVGKKTKIEDSDVDQMDYMKCVIKETLRMHPAAPLLAPRETTSSVKLGGYEIPDKTLVYINAWAIQRDPEFWEMPEEFLPERFENNKVNFNGQDFQFIPFGSGRRKCPGIAFGLASTEHMVANLLYWFDWKLPTNDDASLQEIDMTEKFGLTVNKKVPLRLQPIPYNNFIE* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2734 507 Gene3D Cytochrome P450 24 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2734 507 Pfam Cytochrome P450 37 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2734 507 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2734 507 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2734 507 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2734 507 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 7 502 - -
Psa5g2734 507 SUPERFAMILY Cytochrome P450 37 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2734 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Psa5g2734 507 PANTHER CYTOCHROME P450 71B11-RELATED 7 502 - -
Psa5g2734 507 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2734 507 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2734 507 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2734 507 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2734 507 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2734 507 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2734 507 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2734 507 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g2734 507 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2734 Psa-Chr5 207804815 207806627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2734 17 500 Cytochrome P450 AT5G25180 42.653 5.40e-143 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2734 K20617 - gmx:100803922 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2734 5 207804815 207806627 Psa5g2734 5 207804815 207806627 ECH
Psa4g1443 4 101240103 101243509 Psa5g2734 5 207804815 207806627 PCT