Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2724 ATGCCGCCGGATTCCTCCGAACTAGACAGTGATCCCGATACTGAGTTCGCCGAAATTGATCCTACCGGTAGATATGGCCGGTATAAGGAAGTTTTAGGGAAGGGGGCTTTCAAAAAAGTATACCGAGCTTTTGATGAATTGGAAGGAATTGAAGTGGCTTGGAACCAGGTTAAGGTGTCTGATCTATTGCGTAATTCTGAGGATTTGGAGCGGCTTTACTCGGAAGTTCATTTGCTTAAGACTTTGAAGCATAAGAATATTATTAAATTTTACAGTTCATGGGTTGACACCAAGAGTGAGAATATTAATTTCATTACTGAAATTTTCACGTCCGGAACATTGCGCCAATACCGGAAGAAACATAAGCATGTTGATTTGAGAGCTTTGAAGAAATGGTCTAGACAGATTTTGGAGGGCCTTTCATATCTTCATAGTCATAATCCACCAGTTATTCATAGAGACCTTAAGTGTGACAACATTTTTGTCAATGGGAATCAAGGGGAGGTGAAAATTGGTGATTTAGGGTTGGCTGCCATTCTTCAACAGGCCAGTTCAGCTCACAGTGTTATAGGTACCCCAGAGTTTATGGCCCCAGAACTTTATGAAGAGGAGTACAATGAGCTTGTTGACGTATATGCTTTTGGCATGTGCTTGCTAGAGTTGGTAACTGTTGAGTACCCGTATGTTGAATGTACCAATGCTGCTCAAATATACAAGAAAGTCACATCTGGAATAAAGCCAGCATCATTGGCAAAAGTAAATGATCCCGAAGTTACAGCCTTTATAGAGAAGTGTATTGCTCATGTATCACAACGGTTGCCTGCAAAGACTCTCTTGATGGATCCCTTCCTTCAGTCAGATTTTGATGGTGACAGTGTCGGTCGATCTTCGAGATCTAGAACCCCGCATTCAAGAAATAACTTTGATGATGTACCCATTGCAAAAAGTGCCAAGGATAACTCTGTTGAGGCAAATAGGGAATTCACTGTGGAAGGCCAGAGGAGAGATGTTAATACAATATTTTTAAAACTACGAATTGCTGATTCTTCAGGCCATATTCGAAATATCCATTTCCCTTTCGATATTGGAGAAGACACTTCAGTCGCTGTTGCCAGTGAAATGGTTGAGGAGTTGGAGCTTAGTGATCAAGATGTTTCAACTATTGCAATGACAATTGACTCAGAAATTCGATACCACATCCCTAGCTGGAAACCTAGTGAAATTCCTGACAATAGTTCTTATCAGGATTCAGGCCATACCCATGAAACTATGCCCCAGGCTTCTCCCATAGCAAATGATTCTCCTGGCAGCCTTGCTTTGGAAATATTACCTTCAGGTCGTAAGTACTGGTCAGACTCGCCTAAGGGTGTTGGTGGAAGCTCTCCATATCTGCACGGTGCTTCAAATTTGTCTCATGAAGTGGATATGTTTGCTGAGGCAGGCGTCTTGTTTGCAAATAGTGCGGAGAAGGAATGTGATGGGACTGCTGATTCCCCTTCCAGTGAAAGAAGTTTTACATCAGCCCATTTTGAAACCGCTGGTGAAATGTCCTTTCAAGAAGAAATATCAGTAAGTTTGGAAGAATCTGAAACAGAAGACATCAATAAAATAGCGACAAAGCTGGAAACTTTGTTGGGTATGCAGAGAGAGGAGTTAAACGAACTGAAGAAGAAGCACCAAGTAGCTGTCTCAGATTTTTTGAATGAATTTTCTCCAGAAATTTCCCTACAGCTTCTAAATATATGCAACCTGCAGATGCCTGACTCTGAAGTGTAA 1776 0.4155 MPPDSSELDSDPDTEFAEIDPTGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQVKVSDLLRNSEDLERLYSEVHLLKTLKHKNIIKFYSSWVDTKSENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLSYLHSHNPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQASSAHSVIGTPEFMAPELYEEEYNELVDVYAFGMCLLELVTVEYPYVECTNAAQIYKKVTSGIKPASLAKVNDPEVTAFIEKCIAHVSQRLPAKTLLMDPFLQSDFDGDSVGRSSRSRTPHSRNNFDDVPIAKSAKDNSVEANREFTVEGQRRDVNTIFLKLRIADSSGHIRNIHFPFDIGEDTSVAVASEMVEELELSDQDVSTIAMTIDSEIRYHIPSWKPSEIPDNSSYQDSGHTHETMPQASPIANDSPGSLALEILPSGRKYWSDSPKGVGGSSPYLHGASNLSHEVDMFAEAGVLFANSAEKECDGTADSPSSERSFTSAHFETAGEMSFQEEISVSLEESETEDINKIATKLETLLGMQREELNELKKKHQVAVSDFLNEFSPEISLQLLNICNLQMPDSEV* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2724 591 Gene3D Transferase(Phosphotransferase) domain 1 109 290 - -
Psa5g2724 591 CDD STKc_WNK 24 284 - -
Psa5g2724 591 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 587 - -
Psa5g2724 591 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 342 396 IPR024678 GO:0004674|GO:0005524
Psa5g2724 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Psa5g2724 591 SMART serkin_6 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2724 591 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 10 587 - -
Psa5g2724 591 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2724 591 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Psa5g2724 591 Coils Coil 538 558 - -
Psa5g2724 591 MobiDBLite consensus disorder prediction 291 310 - -
Psa5g2724 591 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2724 591 SUPERFAMILY Protein kinase-like (PK-like) 28 285 IPR011009 -
Psa5g2724 591 Gene3D - 338 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2724 Psa-Chr5 207355885 207360196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2724 102 590 MAP Kinase Kinase Kinase AT3G48260 54.675 1.29e-168 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Psa5g2724 Pkinase 1.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2724 K08867 - gmx:100301899 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2724 5 207355885 207360196 Psa5g2724 5 207355885 207360196 ECH