Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2721 ATGGAATCTGGACCTAGGCTCTATTCATTTGATCACTTCAATTTTGACCCTAAATGGTTCATTGATCCTAAGCATCTTTATGTTGGTCCCCGGATTGGTGAAGGAGCTCATGCTAAAGTCTATGAGGGAAAATATAAAAACCAGATTGTTGCTATTAAAATTGTGCATAAAGGAGACTCTACAGAAGAAATTGCCAAGAGAGAAGATCGGTTTGCAAGGGAGGTAGCTATGTTGTCTAGAGTGCAACATAAGAACTTGGTGAAGTTTATCGGTGCCTGCAAAGAGCCAGTAATGGTGATAGTCACTGAGCTGTTATCAGGTGGAACGCTGCGCAAGTATTTGCTTAACATGCGTCCTAAATGTTTGGATACGCATGTTGCCATTGGTTTTTCACTCGATATTGCACGCGCTATGGAGTGCCTGCATTCTCACGGGATCATACACCGTGATCTTAAACCTGATAACTTGCTATTGACGGAAGACCATGGAACAGTCAAGCTAGCAGATTTTGGTTTAGCAAGAGAAGAGTCTTTAACTGAGATGATGACAGCTGAAACGGGAACATACCGTTGGATGGCTCCAGAGTTATACAGTACTGTCACACTGAGGCAGGGGGAGAAGAAGCATTATAACCATAAAGTTGATGCGTATAGCTTTGCCATTGTGTTTTGGGAGCTCTTACACAACAAAGTTCCTTTTGAAGGCATGTCAAACCTTCAAGCGGCATATGCTGCTGCCTTCAAGAATGTAAGGCCGAGTGCGGATCATCTCCCTGAGGAACTGGCTATAATTCTTACTTCATGCTGGCAAGAGGACGCAAATGCCCGACCCAACTTCACTCAGATAATCCAAATGCTCTTAAATTATCTGTACACCGTTTCGCCTCCTGAGCCTGCAATTCCTTCAAGAATATTTACTTCTGAGAACACAGTGTTGCCGCCTGAGTCTCCTGGTACGAGCTCCTTAATGGCGAAGCGTGATGACACCGGCGATACACCGAGAGTAAAGGACGAAATAAAGCCTAATGGTTTCCTTTGCTGTTTTAGCCAGTGTTATTAA 1059 0.4381 MESGPRLYSFDHFNFDPKWFIDPKHLYVGPRIGEGAHAKVYEGKYKNQIVAIKIVHKGDSTEEIAKREDRFAREVAMLSRVQHKNLVKFIGACKEPVMVIVTELLSGGTLRKYLLNMRPKCLDTHVAIGFSLDIARAMECLHSHGIIHRDLKPDNLLLTEDHGTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVFWELLHNKVPFEGMSNLQAAYAAAFKNVRPSADHLPEELAIILTSCWQEDANARPNFTQIIQMLLNYLYTVSPPEPAIPSRIFTSENTVLPPESPGTSSLMAKRDDTGDTPRVKDEIKPNGFLCCFSQCY* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2721 352 ProSitePatterns Protein kinases ATP-binding region signature. 32 53 IPR017441 GO:0005524
Psa5g2721 352 PANTHER SERINE-THREONINE PROTEIN KINASE 1 327 - -
Psa5g2721 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Psa5g2721 352 Gene3D Transferase(Phosphotransferase) domain 1 106 295 - -
Psa5g2721 352 ProSiteProfiles Protein kinase domain profile. 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2721 352 CDD STKc_MAP3K-like 32 286 - -
Psa5g2721 352 Gene3D Phosphorylase Kinase; domain 1 14 105 - -
Psa5g2721 352 SUPERFAMILY Protein kinase-like (PK-like) 17 314 IPR011009 -
Psa5g2721 352 SMART serkin_6 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2721 352 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 1 327 - -
Psa5g2721 352 MobiDBLite consensus disorder prediction 314 334 - -
Psa5g2721 352 Pfam Protein tyrosine and serine/threonine kinase 29 286 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2721 Psa-Chr5 206651369 206655025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2721 9 352 MAP Kinase Kinase Kinase AT5G50180 79.942 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Psa5g2721 PK_Tyr_Ser-Thr 2.4e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2721 - - gmx:100796593 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2721 5 206651369 206655025 Psa5g2721 5 206651369 206655025 ECH