Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2716 ATGGAATCTAAACCCAAAAACATCAAGCTTCTTTGTAGCTACGGTGGCAAGATCCTCCCTCGATCAACCGATGGTGAACTCCGTTACGTAGGCGGTCACACCAGAGTTCTTGCTGTCGATCGTTCAATTTCGTTTTCAGAATTGATGGAGAAGCTTCGAGAATTCTGTGGTTCATCTGTGAAATTAAGGTGTCAGTTACCAAAAGGAGACTTGGAAACGTTGATATCCATCACCAACGACGAAGATTTGGCTCAAATAACCGATGAATACGATCGTGCCTCGTTGAAATTAACTTACCCATTGAAGATCAGAGCCGTTCTTTCTCCGCCAAAATCGCTCTTGAAAGTTTCTCCCGATCTGTCGTCTTCGTCGTCAAGTGCTAGTCGTTCTCCGTACAGATCACCTTATACTTCATCTGAGTCTCCACCGTACGCGGCGGCGTATCGATTCGGACGTTCGCCACGGGCGCCGGTAGGGTATTCTTTCGGCGCCAGGAATGGATCGGCGAAAGCTTATTGCTATACGGGCCAGTTCGAGAGAGGCCCAAGGCCCTTGTACTATGGGCCTCGTTTTAGTAATTACTGCCATTAA 591 0.4772 MESKPKNIKLLCSYGGKILPRSTDGELRYVGGHTRVLAVDRSISFSELMEKLREFCGSSVKLRCQLPKGDLETLISITNDEDLAQITDEYDRASLKLTYPLKIRAVLSPPKSLLKVSPDLSSSSSSASRSPYRSPYTSSESPPYAAAYRFGRSPRAPVGYSFGARNGSAKAYCYTGQFERGPRPLYYGPRFSNYCH* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2716 196 SUPERFAMILY CAD & PB1 domains 24 112 - -
Psa5g2716 196 MobiDBLite consensus disorder prediction 118 138 - -
Psa5g2716 196 CDD PB1_UP2 11 107 - -
Psa5g2716 196 Gene3D - 28 105 - -
Psa5g2716 196 PANTHER PB1 DOMAIN PROTEIN 4 195 - -
Psa5g2716 196 Pfam PB1 domain 25 97 IPR000270 GO:0005515
Psa5g2716 196 PANTHER OS05G0427100 PROTEIN-RELATED 4 195 - -
Psa5g2716 196 SMART PB1_new 22 102 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2716 Psa-Chr5 206451274 206454729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2716 4 92 MAP Kinase Kinase Kinase AT5G57610 47.191 3.07e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2716 - - gmx:100810563 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2716 5 206451274 206454729 Psa5g2716 5 206451274 206454729 ECH
Psa4g1412 4 99637507 99649764 Psa5g2716 5 206451274 206454729 PCT