Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2677 ATGAAGAATTTGAACTGTTACAAACAAGTTTCTAAGAATGGAAAATCTGGGAGAGGATTTTCGCTTGGGGAGTATCAAAGAGCAGTTTCTTGGTCCAAGTATTTGGTGACACCTGGTGCTGCTATAAAGGGAGGTGAGGAAGAAGAATGGAGTGCTGATATGTCTCAGTTGTTTATTGGATCTAAATTTGCTTCTGGAAGACATAGTAGAATCTATAGAGGGGTTTATAAGCAAATGGATGTTGCTATTAAGCTTGTGAGTCAGCCTGAAGAAGATGAAGATTTGGCTGCTTTTCTTGAGAAGCAGTTTACTTCTGAGGTTGGTTTGCTTCTCAGGTTGCGCCATCCAAATATCCTCACTTTCATTGCCGCTTGCAAGAAACCACCGGTTTTCTGTATAATCACCGAATATTTAGCTGGTGGTTCATTGAGAAAATACCTTCATCAACAAGAACCACATTCGGTTCCACACGAACTCGTTCTGAAATTAGCACTAGACATTGCGAGGGGAATGCAATATCTTCATTCCGAAGGAATACTTCACAGGGATCTCAAATCAGAGAATCTTCTCTTAGACGAAGACATGTGTGTAAAAGTAGCTGATTTTGGTATCTCATGTTTAGAATCTCAGTGCGGAAGTGCGAAAGGATTCACCGGAACGTACCGTTGGATGGCTCCAGAAATGATCAAAGAAAAACACCATACCAAAAAAGTGGATGTTTATAGTTTCGGTATCGTTCTTTGGGAGCTTTTAACCGGATTGACTCCGTTCGATAACATGACACCAGAACAAGCAGCATTTGCAGTTTCATACAAGAATGCAAGACCACCATTGCCATCTGAATGTCCTTGGGCATTTAGTAACCTGATCAACAGATGTTGGTCAAGTAATCCAAACAAAAGGCCACATTTTGTCGAAATCGTTTCAATATTGGAGCGATTCGCCACGTCACTTGAACGAGATTCAGAGTTTTTCTCGACTTACAAACCGCGACCGTCTAATTCAATTCTGGGTTGCTTCCCTAAATGTAAGGCTCGCCAAAAATCTGTTACTTGCAAAGCAAAGCAGTAG 1071 0.4118 MKNLNCYKQVSKNGKSGRGFSLGEYQRAVSWSKYLVTPGAAIKGGEEEEWSADMSQLFIGSKFASGRHSRIYRGVYKQMDVAIKLVSQPEEDEDLAAFLEKQFTSEVGLLLRLRHPNILTFIAACKKPPVFCIITEYLAGGSLRKYLHQQEPHSVPHELVLKLALDIARGMQYLHSEGILHRDLKSENLLLDEDMCVKVADFGISCLESQCGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFGIVLWELLTGLTPFDNMTPEQAAFAVSYKNARPPLPSECPWAFSNLINRCWSSNPNKRPHFVEIVSILERFATSLERDSEFFSTYKPRPSNSILGCFPKCKARQKSVTCKAKQ* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2677 356 Pfam Protein tyrosine and serine/threonine kinase 60 311 IPR001245 GO:0004672|GO:0006468
Psa5g2677 356 CDD STKc_MAP3K-like 64 311 - -
Psa5g2677 356 SUPERFAMILY Protein kinase-like (PK-like) 47 311 IPR011009 -
Psa5g2677 356 SMART serkin_6 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2677 356 PANTHER SERINE-THREONINE PROTEIN KINASE 1 333 - -
Psa5g2677 356 Gene3D Transferase(Phosphotransferase) domain 1 140 336 - -
Psa5g2677 356 Gene3D Phosphorylase Kinase; domain 1 46 138 - -
Psa5g2677 356 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Psa5g2677 356 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Psa5g2677 356 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Psa5g2677 356 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Psa5g2677 356 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Psa5g2677 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Psa5g2677 356 ProSiteProfiles Protein kinase domain profile. 57 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2677 356 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 1 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2677 Psa-Chr5 203949274 203952305 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2677 1 314 MAP Kinase Kinase Kinase AT1G62400 60.502 4.25e-139 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Psa5g2677 PK_Tyr_Ser-Thr 5.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2677 - - gmx:100807757 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2677 5 203949274 203952305 Psa5g2677 5 203949274 203952305 ECH