Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2670 ATGAAGGAAAAGAATGATGGATTTATGAGAGCTGATCAAATTGATCTCAAGAACATAGATGAACAGCTTGAGAGACACCTCAACAAAGCATTGGCTATAGATCATAATGAGGATGTCTCAAACTCTGTTGTCACTGGTGATGGTGCTGTCTTCAACAAGAATCAAAGACAAGAGTGGGAAATTGACCCTTCTAGCCTCATCATCAAGAGTGTTATAGCTCGTGGCACTTTTGGTACTGTTCACCGTGGTGTCTATGATGCTCAAGATGTTGCTGTTAAAATGCTGGACTGGGGTGAAGAAGGGCACAGAACAGAAGCTGAAATTGCGGCACTCAGGTCCGCGTTCACGCAAGAAGTTGTTGTTTGGCATAAACTTGATCATCCTAATGTCACAAAGTTTATAGGAGCAACAATGGGGTCATCTGAATTGCAGATACAAACTGAGAATGGCGTAATTAGCATGCCGAGCAATATCTGTTGTGTGGTTGTCGAGTATCTCCCCGGAGGCGCACTCAAATCTTTCTTAATAAAGAATAGGAGGAGGAAGTTAGCTTTTAAGATCGTCGTCCAGCTAGCACTTGATATGGCTAGAGGACTGAATTATCTTCACTCTCAGAAGATTGTCCACAGAGATGTAAAGACAGAGAACATGCTGTTGGATAAGACGCGAACGGTTAAAATTGGTGATTTCGGAGTTGCGCGTATTGAAGCATTGAATCCTAATGACATGACCGGGGAGACTGGAACACTTGGTTACATGGCTCCTGAGGTTTTAAATGGAAACCCTTATAACAGAAAATGTGATGTATATAGTTTTGGAATCTGTTTATGGGAAATATATTGCTGTGACATGCCATATCCTGACCTCAGTTTCTCAGAGATCACATCAGCCGTTGTTCGCCAGAATGTTAGACCTGAAATACCAAGATGCTGTCCAAGTTCTGTGGCAAATGTAATGAAAAGATGCTGGGATGCGAATCCCGATAAGCGACCTGAAATGGATGAGGTAGTTGCCATGTTGGAGGCTATTGACACATCCAAAGGTGGAGGTATGATCCCTTTTGATCAGCAACATGGTTGTCTCTGCTTCGGTAATCGCCGAGGGCCTTGA 1110 0.4315 MKEKNDGFMRADQIDLKNIDEQLERHLNKALAIDHNEDVSNSVVTGDGAVFNKNQRQEWEIDPSSLIIKSVIARGTFGTVHRGVYDAQDVAVKMLDWGEEGHRTEAEIAALRSAFTQEVVVWHKLDHPNVTKFIGATMGSSELQIQTENGVISMPSNICCVVVEYLPGGALKSFLIKNRRRKLAFKIVVQLALDMARGLNYLHSQKIVHRDVKTENMLLDKTRTVKIGDFGVARIEALNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEITSAVVRQNVRPEIPRCCPSSVANVMKRCWDANPDKRPEMDEVVAMLEAIDTSKGGGMIPFDQQHGCLCFGNRRGP* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2670 369 SUPERFAMILY Protein kinase-like (PK-like) 51 340 IPR011009 -
Psa5g2670 369 SMART serkin_6 66 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2670 369 PRINTS Tyrosine kinase catalytic domain signature 163 176 IPR001245 GO:0004672|GO:0006468
Psa5g2670 369 PRINTS Tyrosine kinase catalytic domain signature 201 219 IPR001245 GO:0004672|GO:0006468
Psa5g2670 369 PRINTS Tyrosine kinase catalytic domain signature 267 289 IPR001245 GO:0004672|GO:0006468
Psa5g2670 369 PRINTS Tyrosine kinase catalytic domain signature 311 333 IPR001245 GO:0004672|GO:0006468
Psa5g2670 369 Pfam Protein tyrosine and serine/threonine kinase 68 340 IPR001245 GO:0004672|GO:0006468
Psa5g2670 369 Gene3D Transferase(Phosphotransferase) domain 1 166 358 - -
Psa5g2670 369 CDD STKc_MAP3K-like 72 340 - -
Psa5g2670 369 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 363 - -
Psa5g2670 369 PIRSF ILK 30 349 - -
Psa5g2670 369 Gene3D Phosphorylase Kinase; domain 1 54 149 - -
Psa5g2670 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Psa5g2670 369 PANTHER - 1 363 - -
Psa5g2670 369 ProSiteProfiles Protein kinase domain profile. 66 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2670 Psa-Chr5 203513474 203516169 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2670 4 369 MAP Kinase Kinase Kinase AT3G22750 64.865 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Psa5g2670 PK_Tyr_Ser-Thr 5.5e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2670 - - gmx:100809898 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2670 5 203513474 203516169 Psa5g2670 5 203513474 203516169 ECH