Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2667 ATGTTTGTTAGTGAGAAGAAGGCTCTATATGAGAAGAGGATGGTTGATCAGTGGATCAAGGTTACGTCTTCTTTTTGGAATGAGGACTTTGACTCCAGAGGAATTGCACTCGAGCATCTTAATTTTCAACTTAACTTCCCCAATGATCTCAATATGGTGAATCAGTTGGGGGCAGAAAAGAGGTCCAACTTGGTGGAAAACCATCTCTTGAGGGGCCTCATACTTGAGCAAGTGATATTCGAAGGCTATACTCAATTTGATAGGAGAGTTTCTTTACTACTATTCTCAGTGACTTATTATGGAGCTTTGAAAATTTACTTGATATCTAATTCCTTAATTTGTCTGGTTTCAAGATGTGAGAAATCCCCTGTTTTGATTCATTGCAAACGAGGAAAGCATAGAACAGGTTGTGTAGTTGGTTGCTTCAGAAAGATGCAGAACTGGTGTCTGTCTTCTGTGTTTGAGAGTACCACGCTATGCTAG 483 0.3975 MFVSEKKALYEKRMVDQWIKVTSSFWNEDFDSRGIALEHLNFQLNFPNDLNMVNQLGAEKRSNLVENHLLRGLILEQVIFEGYTQFDRRVSLLLFSVTYYGALKIYLISNSLICLVSRCEKSPVLIHCKRGKHRTGCVVGCFRKMQNWCLSSVFESTTLC* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2667 160 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 107 155 IPR029021 -
Psa5g2667 160 Gene3D Protein tyrosine phosphatase superfamily 27 160 IPR029021 -
Psa5g2667 160 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP5 111 156 - -
Psa5g2667 160 Pfam Tyrosine phosphatase family 119 155 IPR004861 -
Psa5g2667 160 ProSitePatterns Tyrosine specific protein phosphatases active site. 126 136 IPR016130 GO:0016311|GO:0016791
Psa5g2667 160 PANTHER TYROSINE-PROTEIN PHOSPHATASE 111 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2667 Psa-Chr5 203458309 203462084 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2667 123 156 Protein tyrosine phosphatase (PTP) family AT3G02800 79.412 1.43e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2667 K18045 - osa:9270659 77.0257