Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2666 ATGCCTCCTAATATCCGTCTACCTCCAACCCACCGCCGTCCCCTATCTTTCCCCGCCGTACACCCCTGCCAATCCATATCTCCGGCCACCATCCTCACTTCATTAATCACTCTCTCCCAAAACATATCCACTTTCCAACCAAACTCCTTCCCCACTCAAAAACGAAACTCCCGAGAAACAAAACGCCAAATCCAAATTCTTCTCATTTTCTTCCAAGAACTCCAATCCCATGGCTCTCCCATCCCGAAACCAATCATTCCCATCTTCTCCAACCTTCACTTCATCCTCCAAAAAATCCATTTCTTATTCCAAGACTGTTCCCTCCAAAACGCACGCCTATGGTTACTCATCAAATCCCAATTCATAGCCACACAGTTTCATCTTCTCATTCACTCCATCTCAGAATCTCTCCACGCGTTACCCCTCCACGTTATCAACATATGCGACGAGGTTAAAGAGGTAATTCAATTACTAACCAAACAAAACAGAACAATCAATCTCGTACTAGACCATAACGACGAACGCCAAACCAAACGCGTCATTTCAATTTTGAATCAATTCGAAAAAGGAACAGAACCAGAGGTCGATTCCATCAAACAAGTCCTTGACTACCTTGAAATCAAAACTTGGTTAGATTGCAACGAAGAGATCAAATTCCTCCAATACGAAATAGAATCTGAACAAGAACAAGAGAAAGAGGTTTCTCTATTGAGTGGTTTGAAATGTTTTTTATGCTATTGTCGCGTGGTTCTTTTCGAAACTATAGATTTTCAATTGATAACCCGCAACAGATCCGAAACCAGGTGCAGGCGCAGCATAGAGATGTCAACCTGCGTACCAGATGATTACCGCTGTCCGATTTCACTCGAGTTAATGACAGATCCTGTAACCGTTTCCACTGGCCAAACATACAACAGAGCTTCCATTCAACAATGGTTTAAAGCAGGAAACATAACCTGTCCGAAAACAGGTGAAAAACTCGTTTCCACTGAGGTTTTCCCCAACACAGCTCTCAAAACAATTATCCAACAATTCTGTTACAATAACAGAATTTCAATTTCACCAACTAAATCACACGTTGGCATAACTGTAACCACTGTTAATCCAGGTAGTCCTGCAGCAGCACAGGCGATACAGTTCGCGTCGTGGTCACTAGCTCAGAGATTAGTTTTCGGAACAGATGAACAGAAAAACAAAGCATCTTATGAGATTGGATTACTTGCGAAATCGAACATTTTCAATACTGCGTGTTTGATTGAGATGGGAACCGTCCCACCTTTGATTGATCTTGTTTTAACTTCCACAACGCAGGAGAATGCGATTTTTGCTCTTTTGAAGCTTTCAAAGCATGGTAATGGCCGCGAATTTATCATGGAGAGTCGAGGTTTAGATTCTATAGTTACCGTTCTCATTAGAGGTTATAGTTTAGAAGCGCGCAGATTTGCAGCTGATATAATATTTTATCTCACTTCCGTGAAAGAGTACAGAAAACTAATAGGTGAAAATTCAAAGGTTGTTTCTGGTTTAGTGGAGTTGATAAAGAAAGGAACAATTCGTGGAAAAAAGAGTGGGGTGGATGCGATATTCGGGTTGTTATTGCTTCCTAAGAATCATCCTAAGGTTCTTGCTTCTGGTGCTGTTCCTGCTATTGTTAACGTTTTGTGTTCTTGGGAAAAATCTTATGTTGTTAATGATTGTTTAGCGGTTTTGGTGGCTTTGGCGGAGAATGTGGATGGTTCCCGTGCTGTATTAGATGCTTCGGGTTTGTCTTTGGTGGTTGGGATTTTGCAATCTGCAACTTCGCGTGCTGAGAAGGAGTACTGTGTTTCCATATTGGTTTCCCTGTGTGCTAATATTGGTGATGAGATTGTTAGTGTTCTGGTGAAGGATGGTTCTGTGATTATGCCTTTGCTTTATGCGATTCTTACGAATGGTACTCCTCTAGCGGAAAAGAAAGCACGGAAACTTATCAATGTGTTACAAGAATTTGATGAGAAGAAAACTTTGGGCACTTCTGTTTTGCACCAAAGATTGCTTCAGTTGAATTAG 2049 0.4148 MPPNIRLPPTHRRPLSFPAVHPCQSISPATILTSLITLSQNISTFQPNSFPTQKRNSRETKRQIQILLIFFQELQSHGSPIPKPIIPIFSNLHFILQKIHFLFQDCSLQNARLWLLIKSQFIATQFHLLIHSISESLHALPLHVINICDEVKEVIQLLTKQNRTINLVLDHNDERQTKRVISILNQFEKGTEPEVDSIKQVLDYLEIKTWLDCNEEIKFLQYEIESEQEQEKEVSLLSGLKCFLCYCRVVLFETIDFQLITRNRSETRCRRSIEMSTCVPDDYRCPISLELMTDPVTVSTGQTYNRASIQQWFKAGNITCPKTGEKLVSTEVFPNTALKTIIQQFCYNNRISISPTKSHVGITVTTVNPGSPAAAQAIQFASWSLAQRLVFGTDEQKNKASYEIGLLAKSNIFNTACLIEMGTVPPLIDLVLTSTTQENAIFALLKLSKHGNGREFIMESRGLDSIVTVLIRGYSLEARRFAADIIFYLTSVKEYRKLIGENSKVVSGLVELIKKGTIRGKKSGVDAIFGLLLLPKNHPKVLASGAVPAIVNVLCSWEKSYVVNDCLAVLVALAENVDGSRAVLDASGLSLVVGILQSATSRAEKEYCVSILVSLCANIGDEIVSVLVKDGSVIMPLLYAILTNGTPLAEKKARKLINVLQEFDEKKTLGTSVLHQRLLQLN* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2666 682 SUPERFAMILY RING/U-box 278 351 - -
Psa5g2666 682 Gene3D - 375 678 IPR011989 -
Psa5g2666 682 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 279 353 IPR013083 -
Psa5g2666 682 PANTHER U BOX DOMAIN-CONTAINING 9 669 - -
Psa5g2666 682 SUPERFAMILY ARM repeat 394 657 IPR016024 -
Psa5g2666 682 ProSiteProfiles U-box domain profile. 278 352 IPR003613 GO:0004842|GO:0016567
Psa5g2666 682 Pfam U-box domain 279 350 IPR003613 GO:0004842|GO:0016567
Psa5g2666 682 CDD RING-Ubox_PUB 283 325 IPR045210 -
Psa5g2666 682 PANTHER OS07G0532750 PROTEIN 9 669 - -
Psa5g2666 682 SMART Ubox_2 282 345 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2666 Psa-Chr5 203441231 203444207 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2666 10 668 U-box Gene Family AT1G60190 39.169 3.01e-144 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2666 - - gmx:100810963 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2666 5 203441231 203444207 Psa5g2666 5 203441231 203444207 ECH