Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2655 ATGGGAATCACAGAAGAGAGAGTAGTGGCAGTTATCATGGTTGGAGGCCCCACCAAAGGCACTCGATTCCGTCCATTATCATTCAACGTTCCCAAACCACTCTTCCCATTAGCTGGACAACCCATGGTTCATCACCCCATCTCTGCTTGTCGAAAAATTCCCAATTTGGCCAGGATTTATCTCATTGGTTTCTATGAAGAACGCGAATTCGCATTATATGTATCGTCCATCTCCAATGAACTTAAACTCCCTGTTAGGTACTTGAAAGAGGATAAGCCGCATGGTTCTGCTGGTGGTCTTTATAACTTTAAAGATCTCATCATGGAAGAAGATCCGTCGCATATTTTCTTGCTCAATTGTGATGTTTGCTGCAGTTTTCCACTGCCACAAATGCTAGATGCTCACAAAAAACATGGTGGCATGGGAACAATACTGGTTGTCAAGGTTTCTCCGGAGTCGGCTAGCGAATTTGGGGAATTGGTTGCTGATCCGGTCACCCATGAACTCTTGCATTACACAGAGAGACCTGAAACGTTTGTTAGTGACCTTATAAACTGTGGTGTGTATATATTTACACCAGATATCTTTACTGCCATTGAGGGTGTTTCTTCTCAGTGGAAAGACAGAGCTAACTTAAGGCGTGTCTCCAGCTTTGAAGCAATGGTGCCAGACACAAGGAATCATACGGCCAATTATGTCAGATTGGATCAAGATATCCTCTCACCTCTTGCAGGGAAGAAACAGTTGTATATACATGAAACTTTGGACTTTTGGGAACAAATCAAAACTCCTGGAATGTCCATAAGATGTTCGGCCTTGTATCTTTCACAATTCCGTCACACAGCCCCCCATCTATTAGCAAATGGAGATGGTATTAAGAAAGCCTACATCAGCGGTGATGTTTATATTCATCCATCAGCTAAAGTGAATCCGTCTGCAAAGATTGGTCCTGGTGTATCAATATCGGCAAATGCTCGTATAGGAGCTGGTGCAAGGCTCATAAATTGTATAGTCCTTGATGATGTTGAAATCAAGGAGAATGCTGTTGTTCTTCATGCAATTGTTGGATGGAAATCCTCCATTGGACGATGGGCACGTGTCCAGGGTCGTGGAGATTACAATGCAAAACTCGGCGTCACTATACTTGGTGAATCTGTTGCAGTTGAGGATGAAGTGGTGGTTATTAATAGCATTGTCCTTCCAAACAAGACCTTAAATGTTGGCGTTCAAGATGAGATTATTTTATAG 1248 0.4279 MGITEERVVAVIMVGGPTKGTRFRPLSFNVPKPLFPLAGQPMVHHPISACRKIPNLARIYLIGFYEEREFALYVSSISNELKLPVRYLKEDKPHGSAGGLYNFKDLIMEEDPSHIFLLNCDVCCSFPLPQMLDAHKKHGGMGTILVVKVSPESASEFGELVADPVTHELLHYTERPETFVSDLINCGVYIFTPDIFTAIEGVSSQWKDRANLRRVSSFEAMVPDTRNHTANYVRLDQDILSPLAGKKQLYIHETLDFWEQIKTPGMSIRCSALYLSQFRHTAPHLLANGDGIKKAYISGDVYIHPSAKVNPSAKIGPGVSISANARIGAGARLINCIVLDDVEIKENAVVLHAIVGWKSSIGRWARVQGRGDYNAKLGVTILGESVAVEDEVVVINSIVLPNKTLNVGVQDEIIL* 416
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2655 415 Pfam Nucleotidyl transferase 10 226 IPR005835 GO:0009058|GO:0016779
Psa5g2655 415 PANTHER ADP-GLUCOSE PYROPHOSPHORYLASE FAMILY PROTEIN 3 415 - -
Psa5g2655 415 CDD M1P_guanylylT_A_like_N 10 274 - -
Psa5g2655 415 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 3 415 - -
Psa5g2655 415 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 3 279 IPR029044 -
Psa5g2655 415 SUPERFAMILY Nucleotide-diphospho-sugar transferases 9 357 IPR029044 -
Psa5g2655 415 Gene3D Hexapeptide repeat proteins 283 412 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Psa5g2655 Psa-Chr5 201895770 201903738 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2655 7 350 Eukaryotic Initiation Factors Gene Family AT2G34970 22.715 1.45e-07 52.0
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2655 K00966 - gmx:100817201 736.102
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2655 5 201895770 201903738 Psa5g2655 5 201895770 201903738 ECH