Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2649 ATGAGTCTAAACCTCATCTGGTTCTGGACAGTACTCACCTTTCTGTTTCTGTTTTTTCTAATGACCAATTCAGAATCAGAAAATGTCAGAAAAGCCCTTGTCACCTTCATGCATAAACTTGAACCACCTCATCAGGATTCCACATGGGGTTGGAACCTCACATCAGATCCTTGCACTCATAACTGGCACGGAGTAACTTGCTACACAAACAACCAATACATTAAAAGCATAGTTCTTGAAAAACTTAACTTCACCGGTGTTCTAGACGCGACATCTCTTTGCATTGCTAGCAATCTTCAATTCCTAAGCCTCAACAACAACTACTTACACGGTTTTATATCAGAGGATATAAAAAACTGCAAGTTCTTGACACACTTGCTTCTAAGTGGTAACCAATTCTCTGGCAATCTTCCTCTTTCCATTCCTCAACTACGGAACCTGAAGCGCCTTCATGTTTCCGACAATCACTTCATCGGAAATCTTCCGAATATGGTTAATGTCACAAGCTTGATATCCTTTCTAGCTCAAAACAACGCCTTCACTGGTCAGATTCCTGATTTTGATTTCTCAAACTTTGAAGCTTTTAATGTCTCTAACAACAATTTGAGCGGACCTGTTCCTGATACCGAAGGTTTTTTTAGTGCAGATAGTTTTTATGGTAATCGTAATTTATGTGGAAAACCAATTTCAAACTCTTCATGTCCACCACCACCTCCTCCTCCAACTCCAATTGTCACGAAAGACAATAATAAAAATGCATTTCTTGATGATTTGCCAATTTATTCAGGTTACATAGTTCTTGGTATAATTTTCATTATTTTCTTGATCTTCAAGTTGTTAAAAAAATTCAAGACCAAAAATAAAGAAAAGGTATTAAATCATGTTGAAAAGAAGAACGTGTCAAAAGACACTAGCTTTGTTGTTGGTGGTGAAAAGCTTAGTGAGATACTGAATTCCAATGGATCAAAGAGTTGGTTTAATGGCCTTGGGATTAAATCAGAGTATTCTATGACCTCTATGGAAAGTGGAGTGACTACATCAGGTCTTGTTCTTCTTTCAAGTAGAAAGCTTAGGGGATTGCAGTTCGAGGATCTGTTAAGTGCTCCTGCTGAATTGATTAGGAGAGGAAAACATGGAAGCCTCTACAAGGTTATGCTAGATTATGGGGTGCTTTTGGCTGTTAAGAGGATCAAGGATTGGGGAATTTCAAAGCATGATTTTGAGAGAAGGATGAACTTGATAGCTCAAGTGAAGCATCCTCTTGTAATGTCACCTGTTGCATACTATTGCTCTCAGCAAGAGAAGCTTCTGGCTTATGAATATCTTCCAAATGGTAGCCTCTTCATGTTGCTCTATGGATCTCAAAGTGGACACTCTCTTGACTGGAGGAGCAGACTAGATGTTGCTGTAAAGATAGCAGAAGCTTTGGCCTATATGCATTTGGAGCTTGGTGAGAGTGGAATAGCACATGGTAACTTAAAATCAAGTAACATTCTGTTTAACAAGAACATGGATCCACAAATAAGCGAATACGGTCTAATGGTAGCTGAAAACCAAGGTGTCATGTCGCATAGAAAAAGCCTCAGAAACAGAAATATGTCTCCAGCAGCCACCTTCAGAGCTGATATATATGCATTTGGTGTCATACTTCTCGAACTCCTGACGGGGAAAGTAGTTAAAAATGATGGGTTTGATCTGGTTAAATGGGTGAATTCAGTGATCAGTGAGGAATGGACGGCAGAAGTTTTTGACCGGTCTTTAATCTCACAAGGTGCTTCGGAAGAGAGGATGGTGAACTTGTTGCAGGTGGCATTGAAATGCATAAATCCTTCTCCAAATGATAGGCTAAGTATGAGTCATGTGGCACTCATCACAAATGCGTTGAAAGACGAAGACGACAAATCCATATCTTTTGACACGTGA 1923 0.3942 MSLNLIWFWTVLTFLFLFFLMTNSESENVRKALVTFMHKLEPPHQDSTWGWNLTSDPCTHNWHGVTCYTNNQYIKSIVLEKLNFTGVLDATSLCIASNLQFLSLNNNYLHGFISEDIKNCKFLTHLLLSGNQFSGNLPLSIPQLRNLKRLHVSDNHFIGNLPNMVNVTSLISFLAQNNAFTGQIPDFDFSNFEAFNVSNNNLSGPVPDTEGFFSADSFYGNRNLCGKPISNSSCPPPPPPPTPIVTKDNNKNAFLDDLPIYSGYIVLGIIFIIFLIFKLLKKFKTKNKEKVLNHVEKKNVSKDTSFVVGGEKLSEILNSNGSKSWFNGLGIKSEYSMTSMESGVTTSGLVLLSSRKLRGLQFEDLLSAPAELIRRGKHGSLYKVMLDYGVLLAVKRIKDWGISKHDFERRMNLIAQVKHPLVMSPVAYYCSQQEKLLAYEYLPNGSLFMLLYGSQSGHSLDWRSRLDVAVKIAEALAYMHLELGESGIAHGNLKSSNILFNKNMDPQISEYGLMVAENQGVMSHRKSLRNRNMSPAATFRADIYAFGVILLELLTGKVVKNDGFDLVKWVNSVISEEWTAEVFDRSLISQGASEERMVNLLQVALKCINPSPNDRLSMSHVALITNALKDEDDKSISFDT* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2649 640 SUPERFAMILY Protein kinase-like (PK-like) 371 622 IPR011009 -
Psa5g2649 640 Gene3D Transferase(Phosphotransferase) domain 1 442 639 - -
Psa5g2649 640 SUPERFAMILY L domain-like 27 209 - -
Psa5g2649 640 ProSiteProfiles Protein kinase domain profile. 367 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2649 640 PANTHER OS05G0588300 PROTEIN 8 639 - -
Psa5g2649 640 Pfam Protein kinase domain 373 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2649 640 PANTHER LRR RECEPTOR-LIKE KINASE 8 639 - -
Psa5g2649 640 Gene3D Phosphorylase Kinase; domain 1 339 441 - -
Psa5g2649 640 Gene3D Ribonuclease Inhibitor 26 191 IPR032675 -
Psa5g2649 640 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Psa5g2649 640 Gene3D Ribonuclease Inhibitor 192 236 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2649 Psa-Chr5 201662952 201665099 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2649 26 631 Receptor kinase-like Gene Family AT2G36570 33.535 3.38e-90 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa5g2649 Pkinase 4.9e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2649 - - pvu:PHAVU_009G180700g 824.698