Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2639 ATGATATATAGAAACCAAGTTGAGAACAAGATGAAGAAGGTTTCTCTTTATGCTTGTTTATTACTCAACTTGAGTCTTTTGGCTATTGTTCCATATACCAAAGCTAGTCAAGCTGATAAACTTGATGAGTTGATTCTGTCAAGAAGCTCACAGAATCCTCCTAAGACTTTTACTTGGGAAGAAGAAGATACATTGAAAACACAATCTTCTTCTGCTTATGTTGTACCTTCTCAAGAGGGGCAAAGGCTTGCTGACAAGATTGTCACATTGCCTGGTCAACCCTATGGAGTTAATTTTGATCATTACTCTGGCTACGTTACAGTTGATCATGACACTGAAAAAGAACTTTTCTATTATTTTGTGGAGTCTCCCTCTAACTCTTCCACTAAACCTTTAATATTGTGGCTTAACGGAGGACCTGGTTGTTCCTCACTAGGGTATGGAGCCTTTGAGGAGCTGGGACCCTTCAGAATCAACTCTGATGGAAAAACTCTATACCGTAACCCATATTCTTGGAATGAAGTTGCAAATGTACTTTTCTTGGAATCTCCAGCAGGAGTAGGCTTCTCCTACTCAAACACAACTTCTGACTATGACAAATCAGGAGATAAGACAACTGCAAAGGATGCCTACGTCTTCCTTATCAACTGGTTGGAGAGGTTTCCACAGTACAAAACAAGAGATTTTTACATTACTGGAGAGAGTTATGCTGGTCACTATGTTCCTCAGCTTGCATCCACTATTCTTAACAGCAATAAATTCTATAACCAAACCATTATTAACCTCAAAGGAATTTCTATAGGAAATGCTTGGATTGATGATGCTACAAGTTTAAAAGGGCTATTTGATTACCTTTGGACTCATGCTTTGAATTCAGATCAAACTCATGAGTTGATTGACAAGTACTGTGACTTCACTTCTGAAAATGTTTCAGCAATATGTGCCAATGCAACCACAAAGGCCATAATCGAGAAAGGAAAGATAGATTTCTATAACATCTATGCTCCACTGTGTCATGATTCTTCTCTTAAAAACGGTTCATCTGGTTATGTAAGTAATGATTTTGACCCTTGTTCTGATTACTACGGTATTGCCTATCTAAATACACCAGAGGTTCAAAAGGCTCTTCATGCAAAACCTACAAATTGGACCCATTGCACTCGTGTTCTTCATACCTGGAAAGACAGCCCAGTTACCATCCTTCCCACCATCAAGTACCTCATCGACAGTGGCATTAAATTATGGATATACAGTGGTGATACAGATGCAAGGGTTCCAGTCACTACTTCAAGATATGCAATTAACACCCTCAAGCTTCCTATCAACTCGGCTTGGCGTCCATGGTATTCTGGAAAAGAGATTGGAGGATATGTGGTTGGATACAAAGGACTGACATTTGTTACAATAAGAGGAGCAGGTCATCTTGTTCCAAGCTGGCAACCGGAACGAGCTTTGATTTTGATCTCATCATTCATCTATGGAATTCTGCCTCCTGTTTCACCATCTAATTAA 1512 0.3935 MIYRNQVENKMKKVSLYACLLLNLSLLAIVPYTKASQADKLDELILSRSSQNPPKTFTWEEEDTLKTQSSSAYVVPSQEGQRLADKIVTLPGQPYGVNFDHYSGYVTVDHDTEKELFYYFVESPSNSSTKPLILWLNGGPGCSSLGYGAFEELGPFRINSDGKTLYRNPYSWNEVANVLFLESPAGVGFSYSNTTSDYDKSGDKTTAKDAYVFLINWLERFPQYKTRDFYITGESYAGHYVPQLASTILNSNKFYNQTIINLKGISIGNAWIDDATSLKGLFDYLWTHALNSDQTHELIDKYCDFTSENVSAICANATTKAIIEKGKIDFYNIYAPLCHDSSLKNGSSGYVSNDFDPCSDYYGIAYLNTPEVQKALHAKPTNWTHCTRVLHTWKDSPVTILPTIKYLIDSGIKLWIYSGDTDARVPVTTSRYAINTLKLPINSAWRPWYSGKEIGGYVVGYKGLTFVTIRGAGHLVPSWQPERALILISSFIYGILPPVSPSN* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2639 503 SUPERFAMILY alpha/beta-Hydrolases 85 496 IPR029058 -
Psa5g2639 503 Gene3D - 358 392 - -
Psa5g2639 503 Gene3D alpha/beta hydrolase 82 340 IPR029058 -
Psa5g2639 503 ProSitePatterns Serine carboxypeptidases, serine active site. 231 238 IPR018202 GO:0004185
Psa5g2639 503 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 29 499 IPR001563 GO:0004185|GO:0006508
Psa5g2639 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 180 IPR001563 GO:0004185|GO:0006508
Psa5g2639 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 181 191 IPR001563 GO:0004185|GO:0006508
Psa5g2639 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 217 242 IPR001563 GO:0004185|GO:0006508
Psa5g2639 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 464 477 IPR001563 GO:0004185|GO:0006508
Psa5g2639 503 PANTHER CARBOXYPEPTIDASE 29 499 - -
Psa5g2639 503 ProSitePatterns Serine carboxypeptidases, histidine active site. 464 481 IPR033124 GO:0004185
Psa5g2639 503 Pfam Serine carboxypeptidase 91 493 IPR001563 GO:0004185|GO:0006508
Psa5g2639 503 Gene3D - 400 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2639 Psa-Chr5 201511703 201519555 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2639 355 494 Calmodulin-binding Proteins AT2G22960 31.544 3.81e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2639 K16297 - gmx:100779407 793.497