Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2635 ATGGAAGAAGAAGGCCAACCTATAAGATGTAAAGCCGCGGTTGTAAGAAAACCTGGTGAGCCATTGGTGATTGAAGAGATCATTGTGGCACCACCAATGGCTCGCGAGGTCAGGATTCGTGTTCTGTGTTCATCGATCTGCCATATCGATCTCGCTTTTTCCAACATGAAGGACCTTCCGGGCATTTTCCCGAGAATTCTTGGTCATGAGGCAGCTGGGGTTGTAGAAAGTGTAGGGAAGGACGTAACTGAAGTTACAGAAGGAGATGTTGTTATTCCGATTTTCCTACCAGATTGTGGAGAGTGTATAGATTGCAAATCAACCAAGAGCAACCTCTGTACTAATTTCCCTTTCAAGGTTTCCCCTTGGATGCCAAGACACGGTGCTTCAAGATTCACCGACTCAAATGGAGAGATCATATATCATTTCATGAATGTCTCAAGTTATAGCGAGTACACTGTGGTCGACATTGCCAATGTAACAAAGATTGACCGAGAAGTTCCTCCCGAAAGGGCGTGCCTTCTTAGTTGTGGTATAGGAGCAGGAGTAGGTGCTGCTTGGAGAACTGCAGGTGTGGAGCCAGGGTCTACGGTAGCTATTTTTGGGATGGGATCTATTGGACTAGCGGTTGCTGAGGGTGCTAGACTTTGTGGAGCAACTAAGGTTATAGGTGTAGATGTCAACCCAGAAAAATTTGAAGTTGGTAAAAAGTTTGGGGTCACGGACTTTGTCCATACTGGAGAATGTATGAACAAACCTGTGAGCCAGATCATCATAGAGATGACTGATGGGGGAGCGGATTATTGCTTTGAATGTGTCGGTATGGCGTCATTAGTGCATGAAGCATATGCTTCTTGCAGAAAGGGTTGGGGAAAAACAATTGTCTTAGGATTGGATAAACCTGGATCCAAGTTGAGCCTTAGTTCTAGTGAGGTTCTTCATGATGGGAAGACCCTTCAGGGAAACTTATTTGGAGGCCTCAAACCTAAGTCTCATGTTCCCATTCTACTCAAGCGATACAAGGACAAGGAACTTCAGTTGGATGAATTTGTCACTCATGAAGTGGAGTTTAAGGACATCAATAAAGCTTTTGATTTATTGAGAAATGGAGAATGTCTTCGATGCGTGATTTGGATGGACAAATGA 1146 0.4433 MEEEGQPIRCKAAVVRKPGEPLVIEEIIVAPPMAREVRIRVLCSSICHIDLAFSNMKDLPGIFPRILGHEAAGVVESVGKDVTEVTEGDVVIPIFLPDCGECIDCKSTKSNLCTNFPFKVSPWMPRHGASRFTDSNGEIIYHFMNVSSYSEYTVVDIANVTKIDREVPPERACLLSCGIGAGVGAAWRTAGVEPGSTVAIFGMGSIGLAVAEGARLCGATKVIGVDVNPEKFEVGKKFGVTDFVHTGECMNKPVSQIIIEMTDGGADYCFECVGMASLVHEAYASCRKGWGKTIVLGLDKPGSKLSLSSSEVLHDGKTLQGNLFGGLKPKSHVPILLKRYKDKELQLDEFVTHEVEFKDINKAFDLLRNGECLRCVIWMDK* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2635 381 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Psa5g2635 381 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 4 378 - -
Psa5g2635 381 Gene3D - 13 374 - -
Psa5g2635 381 Gene3D - 182 322 - -
Psa5g2635 381 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 167 342 IPR036291 -
Psa5g2635 381 Pfam Zinc-binding dehydrogenase 206 326 IPR013149 -
Psa5g2635 381 PANTHER ALCOHOL DEHYDROGENASE 4 378 - -
Psa5g2635 381 SUPERFAMILY GroES-like 4 185 IPR011032 -
Psa5g2635 381 SUPERFAMILY GroES-like 330 378 IPR011032 -
Psa5g2635 381 Pfam Alcohol dehydrogenase GroES-like domain 35 162 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2635 Psa-Chr5 201243666 201247258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2635 36 367 Monolignol Biosynthesis Gene Families AT2G21730 26.100 3.58e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2635 K00121 - gmx:100817521 664.84