Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2625 ATGAGAAGTTACAACAGCATTTCAACCAGAAACCTGGCGGCGTTATTATTGCTCTCTCGGACGAGGCCTGGACTTTTCCCACCTTTACACGAGGAAAGTACTAAATCAACAAAGTTTTCTTCTATAGCCACTCAGTTTAAGCAACAACTGCAATCTTTGCTTGAAACATTGAGTGCGACTGAGCCACACTACATTCGTTGTAAAGCCAAATAA 213 0.4178 MRSYNSISTRNLAALLLLSRTRPGLFPPLHEESTKSTKFSSIATQFKQQLQSLLETLSATEPHYIRCKAK* 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2625 70 Gene3D Myosin VI head, motor domain, U50 subdomain 17 38 - -
Psa5g2625 70 ProSiteProfiles Myosin motor domain profile. 1 70 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa5g2625 70 PANTHER MYOSIN HEAVY CHAIN 13 67 - -
Psa5g2625 70 PANTHER MYOSIN 13 67 - -
Psa5g2625 70 Gene3D - 39 60 - -
Psa5g2625 70 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 67 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2625 Psa-Chr5 200901099 200902127 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2625 25 67 Myosins gene family AT1G04600 81.395 2.82e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2625 K10357 - gmx:100788123 82.8037