Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2624 ATGTCACCCATTTTGACCCAAACAAAGAACCATTCTTCGTTGCAAAGTCTCAGATCTCAAAAAATGGATTTTCTGCAGACTCAGAGGATCGAGGTCATAAGCATGGCAGTAGCTCTTGTTGCCATTGTTGGTGGCACCGCTTACTATTACTATCTCACCAAGAAACCTAAAGGGTGCTTGGATCCTGAGAATTTCAAGGAATTTAAACTTGTTAAACGCACTCAACTCAGTCATAATGTTGCCACTTTCAGATTTGATCTTCCCAGTTCTAGCTCCGTATTGGGACTCCCCATTGGGCAACATATCAGCTGCAGAGGGAAAGACAGTCTTGGTGAAGAAGTAATCAAACCATATACTCCAACAACTTTAGATACCGATATTGGATACTTTGAATTGGTTGTAAAGATGTATCCACAAGGAAGAATGTCTCATCACTTCAGTGAGATGCGTGAAGGTGATCACTTAGCCGTGAAAGGACCAAAGGGACGTTTTAAGTACCAACCCAACCAAGTAAAAGCTTTTGGAATGGTTGCTGGTGGCACCGGGATCACTCCAATGTTTCAGGTTACAAGAGCTATACTAGAAAATCCACAGGATAAAACCAACATAAATTTGATATATGCCAATGTCACATATGAGGACATTCTTCTAAAGGAAGAGCTGGATGATTTGACAATTAAGTTCCCAAATCAATTTAAAGTTTATTATGTTCTAAATCAGCCACCAGAAATATGGGATGGCGGTGTCGGATTCGTATCCAAGGAAATGATCCAAACACATTTCCCTGCACCAGCATCAAATATTAAGATATTAAGATGTGGACCACCTCCCATGAACAAGGCTATGGCTGCTCACCTTGAAGCTCTTGGTTACAGTGCTGAGATGCTGTTTCAGTTTTAG 900 0.41 MSPILTQTKNHSSLQSLRSQKMDFLQTQRIEVISMAVALVAIVGGTAYYYYLTKKPKGCLDPENFKEFKLVKRTQLSHNVATFRFDLPSSSSVLGLPIGQHISCRGKDSLGEEVIKPYTPTTLDTDIGYFELVVKMYPQGRMSHHFSEMREGDHLAVKGPKGRFKYQPNQVKAFGMVAGGTGITPMFQVTRAILENPQDKTNINLIYANVTYEDILLKEELDDLTIKFPNQFKVYYVLNQPPEIWDGGVGFVSKEMIQTHFPAPASNIKILRCGPPPMNKAMAAHLEALGYSAEMLFQF* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2624 299 Gene3D Translation factors 56 156 - -
Psa5g2624 299 Pfam Oxidoreductase FAD-binding domain 68 166 IPR008333 -
Psa5g2624 299 Gene3D - 157 298 IPR039261 -
Psa5g2624 299 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 63 167 IPR017927 GO:0016491
Psa5g2624 299 SUPERFAMILY Riboflavin synthase domain-like 56 169 IPR017938 -
Psa5g2624 299 PANTHER NADH-CYTOCHROME B5 REDUCTASE 22 299 IPR001834 GO:0016491
Psa5g2624 299 PRINTS Cytochrome B5 reductase signature 94 105 - -
Psa5g2624 299 PRINTS Cytochrome B5 reductase signature 116 123 - -
Psa5g2624 299 PRINTS Cytochrome B5 reductase signature 152 166 - -
Psa5g2624 299 PRINTS Cytochrome B5 reductase signature 175 194 - -
Psa5g2624 299 PRINTS Cytochrome B5 reductase signature 213 224 - -
Psa5g2624 299 PRINTS Cytochrome B5 reductase signature 269 277 - -
Psa5g2624 299 CDD cyt_b5_reduct_like 68 299 - -
Psa5g2624 299 PANTHER NADH-CYTOCHROME B5 REDUCTASE 22 299 - -
Psa5g2624 299 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 155 296 IPR039261 -
Psa5g2624 299 Pfam Oxidoreductase NAD-binding domain 176 282 IPR001433 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2624 Psa-Chr5 200893366 200895616 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2624 48 299 NADPH P450 reductases AT5G17770 80.556 1.79e-157 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2624 K00326 - gmx:100812559 506.138