Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2616 ATGAAACAACAACACAGATTCACCTTCTTCATTTCTCTTCCGTTATTCATCTCCCTCCTAGCTTCAATCCCAACCACAACACAATCCAAATGCACAAAAGGTTGTTCATTAGCCTTAGCCAACTTCTACCTAGCAAGTGGCACCAACCTCACTTATGTTGCAGGTATCTTGAAATCCCCAATTCTCACCAAACCAGAAGACATAGTTGATTACAACAGAGACACCGTCCCTAACAAAGACATAATTCTTGGCGGCGAAAGAGTCAACATTCCGTTCCCGTGTGATTGCATCAACGGCGACTTTCTTGCTCATAATTTTAGTTACGATGTTCAAACCGGTGACACGTATGCTTCTGTTGCTGGATCCAACTATGCTAATTTAACCAATGTTCAATGGTTGAGAAACTTCAATACTTATCCGCCGAATAGTATTCCTGATACTGGAACGTTGAATGTTATGATTAATTGTTCTTGTGGAGATAGAGAGATTGCGGATTATGGCTTGTTTGTTACTTATCCTCTTAGGCCTGGTGAGACTTTGGGGTCGGTTGCGAATTCGACTAAACTTGATTCCGCGTTGCTGCAGAGGTATAATCCTGGCGTGAATTTTAATCAAGGGAGTGGACTTGTTTTTATTCCTGGCAAAGATAAAAATGGTAGCTATGTGTTTTTGGATACCAGTTCAGGAGGTCTTGCGGGTGGGGCTATTGCTGGAATAGCTGTTGGAATAGTTGTCCTTCTTTTATTGGCAGCTGGTGTATATTTTGGATACTTCCGAAAGAAGAAGATACAGAAAGAGAACTCTCTTTCACGAGATTCCACTTCACTTTTCCCTCAGGATGGGAAGGATGAAACTTCTCGTAATGCTGTGATCACCGGCATAACAGTCGACAAATCAGTTGAATTCTCATATGATGAACTGGCAGCTGCCTCAGATAACTTTAGCATGGCTAATAAAATTGGTCAAGGAGGTTTTGGCTCTGTCTACTATGCAGAGCTGAGGGGAGAGAAAGCTGCAATAAAAAAGATGGATATGCAAGCAACAAAGGAATTTCTTGCTGAATTGAATGTCCTGACACGCGTTCATCATCTTAACTTGGTGCGGTTGATTGGATATAGTATTGAGGGCTCTCTTTTCCTTGTCTATGAATACATCGAGAATGGAAACTTGAGTCAGCATTTGCGTGGTTCAGGTAGAGATCCACTGCCATGGGCTACACGAGTGCAAATTGCTTTGGATTCTGCCAGAGGTCTTGAATATATCCATGAGCATACAGTGCCCGTATATATCCATCGTGACATAAAGCCAGCAAATATATTGATAGACAAAAACTTCCGGGGGAAGGTTGCTGATTTTGGATTGACCAAACTGACGGAAGTTGGAAGCTCATCACTTCCCACTGGTCGTCTTGTCGGCACATTTGGATACATGCCACCAGAGTATGCTCAATATGGAGATGTTTCTCCCAAAGTAGATGTTTATGCCTTCGGAGTTGTTCTTTATGAAATTATTTCGGCAAAGGAGGCAATCGTCAAGACCAGCGAATCTGTTGCTGCAGACTCAAAGGGACTCGTATCTATGTTTGAAGGTGTTCTTAGTCAGCCCGATCCTTCCGAAGATCTTCGTAAAATAGTGGATCCAAGGCTTGGGGATAACTACCCTGTAGATTCAGTGCGCAAGATGGCTCAACTAGCGAAAGCGTGTACACAGGAAAATCCTCAACTGCGTCCGAGTATGAGATCCATTGTGGTTGCTCTTATGACACTTTCTTCAACTACGGACGATTGGGATATTGGCTCCTTTTACGAAAATCAAAATCTTGTGAATCTTATGTCAGGAAGATAG 1845 0.426 MKQQHRFTFFISLPLFISLLASIPTTTQSKCTKGCSLALANFYLASGTNLTYVAGILKSPILTKPEDIVDYNRDTVPNKDIILGGERVNIPFPCDCINGDFLAHNFSYDVQTGDTYASVAGSNYANLTNVQWLRNFNTYPPNSIPDTGTLNVMINCSCGDREIADYGLFVTYPLRPGETLGSVANSTKLDSALLQRYNPGVNFNQGSGLVFIPGKDKNGSYVFLDTSSGGLAGGAIAGIAVGIVVLLLLAAGVYFGYFRKKKIQKENSLSRDSTSLFPQDGKDETSRNAVITGITVDKSVEFSYDELAAASDNFSMANKIGQGGFGSVYYAELRGEKAAIKKMDMQATKEFLAELNVLTRVHHLNLVRLIGYSIEGSLFLVYEYIENGNLSQHLRGSGRDPLPWATRVQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYEIISAKEAIVKTSESVAADSKGLVSMFEGVLSQPDPSEDLRKIVDPRLGDNYPVDSVRKMAQLAKACTQENPQLRPSMRSIVVALMTLSSTTDDWDIGSFYENQNLVNLMSGR* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2616 614 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Psa5g2616 614 ProSiteProfiles Protein kinase domain profile. 314 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2616 614 Gene3D Phosphorylase Kinase; domain 1 286 384 - -
Psa5g2616 614 SMART serkin_6 314 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2616 614 SUPERFAMILY Protein kinase-like (PK-like) 291 586 IPR011009 -
Psa5g2616 614 Gene3D Transferase(Phosphotransferase) domain 1 385 605 - -
Psa5g2616 614 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 15 614 - -
Psa5g2616 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Psa5g2616 614 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 15 614 IPR044812 GO:0019199|GO:0045087
Psa5g2616 614 Pfam Protein tyrosine and serine/threonine kinase 316 585 IPR001245 GO:0004672|GO:0006468
Psa5g2616 614 CDD STKc_IRAK 320 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2616 Psa-Chr5 200687969 200693741 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2616 11 614 Receptor kinase-like Gene Family AT3G21630 58.937 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Psa5g2616 PK_Tyr_Ser-Thr 7.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2616 - K13429 gmx:100777781 928.702