Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2592 GAACATGTGTCGAAGTGAATGCGAAAACCAAAATTCATGTGCATTACTTTGTCAAATTCACAATGTATGTGCCATGTTTGATCATGATTTGGTTGATGCCGCTGTGATTTCACTATGGCTTTGTTGCAGGGGTCATGGCAGGTTGAGAATGAACGAGATGTTTCCTGATACAAATCAGCTTACCATCTTCTATAACGGGAATATTTGTAGCTATAACGGAATTCCAGCGGAAAAGATGCAAGGAATAATGCTCCTGGTTGCTGCTGCTGCCAAGTCTACGGAAACGAAGAATACCATGAAACAATCTCCTGTTCCTTCACCGATTCCCTCAAGCCCACCTTCTCCAGTTGCTGCTGCTGATAATGTCACTTCACCGCAGGCACTCTGCTTTCCTTATCCGTCTTCGCCAAAAAATGAAGGTGGCTGA 427 0.4403 NMCRSECENQNSCALLCQIHNVCAMFDHDLVDAAVISLWLCCRGHGRLRMNEMFPDTNQLTIFYNGNICSYNGIPAEKMQGIMLLVAAAAKSTETKNTMKQSPVPSPIPSSPPSPVAAADNVTSPQALCFPYPSSPKNEGG* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2592 141 ProSiteProfiles Tify domain profile. 53 88 IPR010399 -
Psa5g2592 141 MobiDBLite consensus disorder prediction 95 120 - -
Psa5g2592 141 Pfam tify domain 56 86 IPR010399 -
Psa5g2592 141 PANTHER DIVERGENT CCT MOTIF PROTEIN 50 128 - -
Psa5g2592 141 SMART tify_2 53 88 IPR010399 -
Psa5g2592 141 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 50 128 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2592 Psa-Chr5 199368880 199369450 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2592 58 131 Tify Gene Family AT5G20900 45.946 4.58e-13 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Psa5g2592 tify 4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2592 K13464 - gmx:100306045 79.3369