Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2581 ATGAAGAGGGCAATCTCGGTGGGATCATTAGACGGAAGAGCCGCGATAGAACTCGAAAACGCGATTCTGCTAAATCCTTCTTTATTTCCTAAAAAAGATGCATCCTTTGAAGAAGATTCACCAATTGATCATGAGTGTGGAAATTTTTCACAAAATGTAATAAGAAGTAAAGTGCTTAGCAGCATTAAAGTTGTAGTCTTTTCAACCAAGATAAACTTGCTTATGCCTTTTGGTCCTATGGCGATTTTGGTAGATAGATTGTTTCATAGTCATGGTTGGGTTTTTGTTTTCAGCATATTAGGTATTATACCCTTGGCAGAGCGTTTGGGCTATACAACCGAGCAGCTAGCCCTCTTTACTGGACCGGCAGTTGGTGGTCTTTTATATGCCACATTTGGAAATGCGACGGAGTTGATTATATCAATTCACGCTCTCAAAAGCGGTTATATTCGTCTTGTTCAACAATCGCTACTAGGCTCAATTCTGTCTAACCTGTTGCTGGTACTTGGATGTGCATTATTTGCTGGTGGATTAGTATTTCATAAGAAAGAACAAGTATTTAACCATGCAGATACTAGTGTGGATTTCGGATTGTTATTGATGGCCGTGATGGGACTGTTATTTCCCGCAGTTCTCCATGCTACACAAACAGAACTAGAATATGGAAAGTCTCAGTTATCTCTTTCAAGATTTACTAGTTGCATTATGCTTGTGGCATATGCTTCATATATAGTATTTCAATTGAAGAGTCAGAAGAATTTGGAACTGGACAAGAGTTTCGACGAAGATACTTCAAATGATGCTGAAGCTCCTGAGATTTCAATGTGGGAATCAATGATATGGACTTCAATCCTAACAGGAGGTATATCTATATTGTCAGAATACTTGGTTAAAACCATAGAGGGGGCATCAAAAGAGTTTCAAATGCCTGTGTCATTTCTTAGTGTTATTCTTCTTCCAGTAGTAGGTAATGCTGCAGAACATGTTGGATCTGTTATGTTTGCTGTCAAAGACAAACTTGACATGTCGCTGGCCGTGGCTGTAGGATCTTCAATACAAATATCTATGTTTGCAATTCCATTTTGCGTCGTCATTGGATGGATGATTGGGTGCCCTATGGACTTAAATTTCCAGCCTTTTGAAACAATTTCTCTTTTCATGTCAGTTATCATAGTTGCCTTCATGCTGCAAAATGGAGCTTCGAACTACTTCAAAGGAATAGTGCTCATTCTTTGCTATTTGATAGTTTCTGCAGGTTTTTTTGAACATATTGATCCTATGTCAGTTGAAGATAATCCCTCAACTGCTGGTCAGTAA 1317 0.3865 MKRAISVGSLDGRAAIELENAILLNPSLFPKKDASFEEDSPIDHECGNFSQNVIRSKVLSSIKVVVFSTKINLLMPFGPMAILVDRLFHSHGWVFVFSILGIIPLAERLGYTTEQLALFTGPAVGGLLYATFGNATELIISIHALKSGYIRLVQQSLLGSILSNLLLVLGCALFAGGLVFHKKEQVFNHADTSVDFGLLLMAVMGLLFPAVLHATQTELEYGKSQLSLSRFTSCIMLVAYASYIVFQLKSQKNLELDKSFDEDTSNDAEAPEISMWESMIWTSILTGGISILSEYLVKTIEGASKEFQMPVSFLSVILLPVVGNAAEHVGSVMFAVKDKLDMSLAVAVGSSIQISMFAIPFCVVIGWMIGCPMDLNFQPFETISLFMSVIIVAFMLQNGASNYFKGIVLILCYLIVSAGFFEHIDPMSVEDNPSTAGQ* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2581 438 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 6 433 IPR004713 GO:0006812|GO:0008324|GO:0016021
Psa5g2581 438 PANTHER VACUOLAR CATION/PROTON EXCHANGER 6 433 - -
Psa5g2581 438 TIGRFAM caca2: calcium/proton exchanger 58 421 - -
Psa5g2581 438 TIGRFAM cax: calcium/proton exchanger 75 421 IPR004798 GO:0006816|GO:0015369
Psa5g2581 438 Pfam Sodium/calcium exchanger protein 93 248 IPR004837 GO:0016021|GO:0055085
Psa5g2581 438 Pfam Sodium/calcium exchanger protein 285 416 IPR004837 GO:0016021|GO:0055085
Psa5g2581 438 Gene3D - 122 420 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2581 Psa-Chr5 198219912 198222716 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2581 14 426 Antiporters AT3G13320 61.575 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2581 K07300 - jre:109000743 555.829