Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2579 ATGATTTGTTTCAACAGTTTGAAAGTGAGGTTGTTATCAGACTGGACACTCACAATGAAGTTTGCACTTCTAAGGCATACTTTTTTTGAAGTGTGTGCTCTGAAAAACAACTTCAGAAGTTGGATAGATGTCAGCTCCGAAGAGTTGGAATTCTTGTGCATGAAGGAAGCAAAAAGGAACTTCCATGCCAAACTCTTTGGTATAGTTGAACATTTGCTTCAGAAGGTTCCTCCAACGCTTCTTCTTCCTACTCCAGAAGTGATCCCTCCTCCTCAACCAGAACATTTGACTTTGGTTGCTTATGAGACAACTCTTGAAGCTAGAAGTGTTTATGGGACGAGTAATATGAGTATCAAATCAGACGGATCGTTGCTTCAATATTGTGTTTATTTTCTCTCCTTGTTTTTTCTTCTGCTCTCTCTACATACTCCCACATTTGCACTGAAAAAGTCTTATGTGGTTTACTTAGGAGGACACTTGCATGATTCAAATTCCTCATCAGTTGAGTTCAACCGTGCAAGTGATTCTCACTATGAGTTTCTAGAATCTTTCTTGGAAAGCTCCTCTGATACAGCAAAAGATTCAATCTTTTACTCCTACACAAGACATATCAACGGTTTTGCTGCAATTTTGGAAGAACAAGTAGCAGCTGAGATAGCAAAACATCCAAATGTGGTGTCGGTATTCGAGAATAAGGGAAAGAAACTACAGACGACACGAACATGGGGGTTCATGGGGTTAGAAGATGATAATGAAGTTATACCATCCAACTCAATATGGAACAAAGCTAGATTTGGTGAAGATGTCATCATAGCTAACCTTGATACAGGTGTTTGGCCTGAATCAAAAAGTTTTAGTGATGAAGAGTTTGGACCAATTCCATCTAAGTGGAGAGGAATCTGTGAAAAAGGATCTGATCTTGATTTCCACTGCAACAGGAAACTAATTGGGGCAAGGTATTTCAACAAAGGTTACGGTTCAAGATTATCTACCCCACTCAACTCATCCTTTAACACACCTCGTGACATCGAAGGCCATGGATCTCATACATTATCAACAGCGGGTGGAAACATGGTACCTGGAGTAAGTATCTTTGGTCAAGGCTATGGAACAGCAAAGGGTGGTTCACCGAAAGCAAGAGTTGCATCATACAAAGTTTGTTGGCCTCCAGTTATTGATGGCGAGTGCTTTGATGCCGACATACTTGCAGCGTTTGATATGGCTATCCATGACGGTGTTGATATTTTGTCGGTGTCATTGGTCGGACCTACATTTAACTTTTTATATGATAGTATTGCTATCGGTTCCTTCCATGCTGCTATGAAGGGTATTGTTGTTGTTTGCTCTGCTGGCAATACTGGACCTTTTGATGCAACGATAGGAAATCAAGCTCCATGGTATATTACAGTTGCTGCTAGCACTATGGACAGACAGTTCCCTAGTTATGTTGTTCTTGGTAACAATTTAATCTTAAAGGGGGAAAGCTTATCAGCTACAAGATTAGCACGCAAATTCTACCCAATTATTAAAGGAACAGATGCTAAATTGGCAAGTGCAACAAATGAAGATGCTGTGCTTTGCAAGAATGGAACTCTGGATCCTAAAAAGGTGAAGGGTAAGATAGTAGTGTGCCAGAATGGACAATATTTCAGATCAAATGAAGAAGAACAGGTTCTTAAAGCTGATGGTGCTGTGGGAATGATCCTTTGCAATAATATGATTATTGACAATGTGATTACAGCTGCTCTTCATGTTCTTCCTACTTCTCACATCAGTTTCTCCGATGGTGTACAAGTCATTAACTACATCAACTCTTCCAAGTCTCCAGTGGCTTATATTACATATCCAACAACAAAGCTTCATATTAAGCCGGCCCCTTTCATGGCAGTATTTTCATCCAAAGGACCAAATACTATTGTGCCTGAGATTCTGAAGCCCGATATCACTGCACCAGGAGTGTTAGTTATAGCAGCCTACACTGAAGCGGAAGGGCCAACTAATCAAGGGTTCGACTATCACCGGGTTAAATTTAAAGCACTCTCCGGCACTTCGATGTCATGCCCTCACATTTCGGGAATTGCAGGACTGTTGAAAACCCTGTATCCTTCTTGGAGTCCTGCTGCTATTAAATCGGCTATCATGACCACAGCTACAACATTTGACAACGAGGCGGAGCCGCTGCTGAATGCATCCTACAGTACAGCCAAGCTACACCATTTAGCTATGGAGCAGGACATGTTCAACCTAACAATGCAATGGATCCTGGTCTTGTTTATGACACAACAATAG 2289 0.4115 MICFNSLKVRLLSDWTLTMKFALLRHTFFEVCALKNNFRSWIDVSSEELEFLCMKEAKRNFHAKLFGIVEHLLQKVPPTLLLPTPEVIPPPQPEHLTLVAYETTLEARSVYGTSNMSIKSDGSLLQYCVYFLSLFFLLLSLHTPTFALKKSYVVYLGGHLHDSNSSSVEFNRASDSHYEFLESFLESSSDTAKDSIFYSYTRHINGFAAILEEQVAAEIAKHPNVVSVFENKGKKLQTTRTWGFMGLEDDNEVIPSNSIWNKARFGEDVIIANLDTGVWPESKSFSDEEFGPIPSKWRGICEKGSDLDFHCNRKLIGARYFNKGYGSRLSTPLNSSFNTPRDIEGHGSHTLSTAGGNMVPGVSIFGQGYGTAKGGSPKARVASYKVCWPPVIDGECFDADILAAFDMAIHDGVDILSVSLVGPTFNFLYDSIAIGSFHAAMKGIVVVCSAGNTGPFDATIGNQAPWYITVAASTMDRQFPSYVVLGNNLILKGESLSATRLARKFYPIIKGTDAKLASATNEDAVLCKNGTLDPKKVKGKIVVCQNGQYFRSNEEEQVLKADGAVGMILCNNMIIDNVITAALHVLPTSHISFSDGVQVINYINSSKSPVAYITYPTTKLHIKPAPFMAVFSSKGPNTIVPEILKPDITAPGVLVIAAYTEAEGPTNQGFDYHRVKFKALSGTSMSCPHISGIAGLLKTLYPSWSPAAIKSAIMTTATTFDNEAEPLLNASYSTAKLHHLAMEQDMFNLTMQWILVLFMTQQ* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2579 762 ProSitePatterns Serine proteases, subtilase family, serine active site. 682 692 IPR023828 -
Psa5g2579 762 Pfam PA domain 527 597 IPR003137 -
Psa5g2579 762 CDD Peptidases_S8_3 234 718 IPR034197 -
Psa5g2579 762 PANTHER SUBTILISIN-LIKE PROTEASE 141 735 - -
Psa5g2579 762 Gene3D Peptidase S8/S53 domain 268 726 IPR036852 GO:0004252|GO:0006508
Psa5g2579 762 SUPERFAMILY Subtilisin-like 237 726 IPR036852 GO:0004252|GO:0006508
Psa5g2579 762 PRINTS Subtilisin serine protease family (S8) signature 266 285 IPR015500 -
Psa5g2579 762 PRINTS Subtilisin serine protease family (S8) signature 342 355 IPR015500 -
Psa5g2579 762 PRINTS Subtilisin serine protease family (S8) signature 681 697 IPR015500 -
Psa5g2579 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 141 735 IPR045051 -
Psa5g2579 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 142 237 IPR037045 -
Psa5g2579 762 Pfam Peptidase inhibitor I9 151 232 IPR010259 -
Psa5g2579 762 CDD PA_subtilisin_like 482 613 - -
Psa5g2579 762 Gene3D - 476 620 - -
Psa5g2579 762 ProSiteProfiles Serine proteases, subtilase domain profile. 241 743 - -
Psa5g2579 762 Pfam Subtilase family 266 720 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2579 Psa-Chr5 198179773 198189001 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2579 151 731 Subtilisin-like Serine Gene Family AT2G04160 62.371 0.0 729