Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2577 ATGGATAGTAGACCTTCTCTTGGCTCTTTGTTTATCCTTCTTGGTCTTACTTCACTTTTGGTGAAATGTTACTCATCTTCTGAAGATAATATGAAGACTTACATTGTCTACACCGGGAAGATCATAAATGATGAAGCGTCTTCGCTGATCATTTACCAAAATATGTTAAATCAAGTTGCTGAGAGTAATTCAACATCAAAATCTGTACTCTACCATTACAAACGTAGCTTCAGTGGCTTTGCTGCAAAGCTAACGGTGGAAGAAGCTCGCCGAATGGCTGGACTTGATGGGGTGGTGTCTGTATTTCCAAATGAAAAGAGACAGCTCCTTACCACCCGATCTTGGGATTTTATAGGATTTCCAGAATATGTCGAGAGAGAATACAATGAATATGATGTCATAATTGGAGTGATAGATTCTGGAATTTGGCCGGAATCAGAAAGTTTCGACGATAAAGGATATGGTCCACCACCAAGCAAATGGAAAGGCATTTGCCAATCTTCTGATTTTACATGCAACAACAAAATAATTGGGGCCAGATATTATAGAAATGATTATGGAGAAGACTTCTTGAAAAATAATATCTTATCCCCAAGAGACACAACTGGGCATGGGACCCATACAGCATCAACAGCGGCTGGAAACCCTGTTAGCAGGACAAGTATGTTAGGCCTTGGCCATGGAACAACAAGAGGAGGGGCTTCCTCAGCAAGAATTGCGGTTTATAAAGTATGTTGGTCTGATGAATGTCAGGATGTGGACATTCTTGCAGCATTTGACGATGCTGTTATTGATGGAGTTGACATATTATCCGTCTCTATTGGAGGAAAGTCAGATGCTAGCATCCATTTTATGGATGCATTCTCAGTTGGATCATTCCATGCAATGAAAAAGGGAATACTAACTGTCCTTGCGGCAGGGAACTTCGGTCCAAAAAGTTCGTCCCTAACAAATTTTTCACCTTGGTCAATTAGTGTTGCTGCAAGCACCATGGATAGAAAATTTGTTACAAAGGTCAAATTAGGAGATAACAAAATTTACGAGGGTACTTCTTTGAATACATTTGACCTTCAGGGAGAACTGTGGCCGATTATCTATGCTGGTGATGCGCCAAATAAGGAAGCAGGCTTCGATAAAGATTCATCCAGGAACTGCTCAGCCAACTCGTTGGATATCAAGTTGGTGAAGGGTAAAATTCTTCTATGTGAAGACAGAATAGGACCTTCTGAAGCCTATAGAGTTGGTGCTGTGGGTGTCTTGGTACAAGGTCAAAAATCTCTTGATACCGCAAATTCTTTTCCCTTGCCTGGATGTTACCTTCATTCCAAGGATGCCGCCAAAGTACATAAATATATCAAGTCTAGAAGGAATCCGGTAGCAACTATATTTAAAACATATGAGTCAAATGATACTTTGGCACCTATGGCTGCCTCTTTCTCGTCAAGGGGTCCTAATAATGCTACGCCTGAAATTCTAAAGCCTGATTTAACTGCTCCTGGAGTAGACATTTTAGCCAGTTGGTCTCCAATGTCTCCAATTTCTCAATTTCATGGTGAGAAAAGAAAATTGGAGTTCAATATTGTGTCTGGAACATCAATGTCGTGTCCCCACGTTTCTGGTGCAGCAGCATATATAAAATCCTTTTATCCTACATGGTCACCTGCTGCTATACGCTCAGCTCTAATGACGACAGCCAAACAAATGAGCCCAGAAAAGAACCGTGACGCAGAATTTGCGTATGGAGCTGGACAAGTTGACCCTATGAAGGCTTTGAATCCGGGTTTAGTATATGATGCAGATGAAGAAGAATATATTAGGTTTTTATGTGGTCAAGGTTTAGATATGTCTATGTTACTCCAAATCACAGAGAGTATAATCAATTGCTCAGAGAGAGGATATATGATACCTAGAGACCTAAATTATCCTTCATTTGCTTTCAAAGTCCAACGGCCCAAACATCACTTGAACGCAAGCTCTAAAAGGACTGTTACAAATGTAGGGCTTGCTATGTCTACCTATAGAGCATTTGTAACCGCTCGTAAAGGATTCAACATTTCAGTGACCCCCGACTTGTTATCATTTACATCCTTGGGAGAGAAACAAACATTTACTCTCACTATAAATGGAAAAATGAAGAAATCAATTGGTTCAGCTTCTTTGATTTGGGACAATGGTAAATTTCAAGTGAGGAGTCCCATTGTTGTATTTGATGAGCGAGCGGTGAACGGTGCCAGTTTATATCGTATAAATTACTTATATATTGTAATTTTTAATTTACTATTTTATATTACTATTATTGGATAA 2304 0.3971 MDSRPSLGSLFILLGLTSLLVKCYSSSEDNMKTYIVYTGKIINDEASSLIIYQNMLNQVAESNSTSKSVLYHYKRSFSGFAAKLTVEEARRMAGLDGVVSVFPNEKRQLLTTRSWDFIGFPEYVEREYNEYDVIIGVIDSGIWPESESFDDKGYGPPPSKWKGICQSSDFTCNNKIIGARYYRNDYGEDFLKNNILSPRDTTGHGTHTASTAAGNPVSRTSMLGLGHGTTRGGASSARIAVYKVCWSDECQDVDILAAFDDAVIDGVDILSVSIGGKSDASIHFMDAFSVGSFHAMKKGILTVLAAGNFGPKSSSLTNFSPWSISVAASTMDRKFVTKVKLGDNKIYEGTSLNTFDLQGELWPIIYAGDAPNKEAGFDKDSSRNCSANSLDIKLVKGKILLCEDRIGPSEAYRVGAVGVLVQGQKSLDTANSFPLPGCYLHSKDAAKVHKYIKSRRNPVATIFKTYESNDTLAPMAASFSSRGPNNATPEILKPDLTAPGVDILASWSPMSPISQFHGEKRKLEFNIVSGTSMSCPHVSGAAAYIKSFYPTWSPAAIRSALMTTAKQMSPEKNRDAEFAYGAGQVDPMKALNPGLVYDADEEEYIRFLCGQGLDMSMLLQITESIINCSERGYMIPRDLNYPSFAFKVQRPKHHLNASSKRTVTNVGLAMSTYRAFVTARKGFNISVTPDLLSFTSLGEKQTFTLTINGKMKKSIGSASLIWDNGKFQVRSPIVVFDERAVNGASLYRINYLYIVIFNLLFYITIIG* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2577 767 PANTHER PUTATIVE-RELATED 22 737 - -
Psa5g2577 767 CDD Peptidases_S8_3 108 565 IPR034197 -
Psa5g2577 767 Gene3D - 332 469 - -
Psa5g2577 767 Pfam Subtilase family 132 583 IPR000209 GO:0006508|GO:0008236
Psa5g2577 767 SUPERFAMILY Subtilisin-like 109 595 IPR036852 GO:0004252|GO:0006508
Psa5g2577 767 ProSitePatterns Serine proteases, subtilase family, serine active site. 530 540 IPR023828 -
Psa5g2577 767 Pfam Peptidase inhibitor I9 33 109 IPR010259 -
Psa5g2577 767 Gene3D Peptidase S8/S53 domain 132 604 IPR036852 GO:0004252|GO:0006508
Psa5g2577 767 CDD PA_subtilisin_like 339 462 - -
Psa5g2577 767 ProSiteProfiles Serine proteases, subtilase domain profile. 114 591 - -
Psa5g2577 767 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Psa5g2577 767 PRINTS Subtilisin serine protease family (S8) signature 200 213 IPR015500 -
Psa5g2577 767 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
Psa5g2577 767 Gene3D - 608 737 - -
Psa5g2577 767 Pfam Fibronectin type-III domain 638 735 IPR041469 -
Psa5g2577 767 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 109 IPR037045 -
Psa5g2577 767 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 737 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2577 Psa-Chr5 198093386 198097387 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2577 49 736 Subtilisin-like Serine Gene Family AT5G59190 48.429 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2577 - - cam:101506276 1008.44