Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2567 ATGGATTCTGCAGACGGAAATGGAAATGGAAATGGGCACGAGGAGTCGTTGCCTCCTCCGCCTCCTGTTGTCCCCTCAGATTTGGTGCCTCTCAAAGTAGAGGAGGTGCCCTCAGCCCCTCCTGAACCTGTTAAGAAAAAAATTACTCGTCTTCCAATAGCAAGATGCGGTTTGGGGTCAAAAGGAATGAAGATACCTCTTTTAACTAATCACTTTAATGTTAACATCGGTAAAAATGATGGATATTTTTTTCAGTACAGTGTGTCTTTTACTTATGAAGATGGACGCCCTGTGGAAGGTAAGGGTGTTGGGAGGAAGATAATGGACCGGGTGCAGGAGACATATGCTTCAGACTTGAATGGCAAGGAATTTGCATACGACGGGGAGAAAAGTCTGTTTACTATCGGCTCTCTTCCTCAAAACAAGCTTGAGTTTGAGATTGTTTTAGAGGAGGCTAGATCTAACAGAAATAATGGTAATCTTAGTCCTGATGGTAATGCGGACAATGAGAGTGACAAAAAGAGGGTCCGACGCCCCTTCAATTCGAAGGCATTTAAAGTTGAGATTAGCTTTGCTACCAAAGTTCCTATGTATGCCATTGCCAATGCGTTACGCGGGCAGGAAACTGAGAATTTCCAAGAAGCTGTTAGAGTTCTTGATATCATATTGAGGCAACATGCTGCTAAGCAGGGCTGCCTACTTGTGCGTCAAAACTTTTTTCATAATGATCCCAAGAGTTTTGCTGATGTTGGAGGTGGTGTTCTAGGCTGTAGAGGATTCCATTCAAGTTTTAGAGCTACCCAGAGCGGCCTCTCCCTTAACATAGATGTCACAACCACCATGATAATTCAACCCGGGCCTGTGGTGGATTTCTTAATTTCCAATCAAAATGCGAGAGATCCTTTTCAACTTGACTGGGCGAAGGCTAAAAGGACACTAAAAAATCTGAGGGTCAAAACTCATCCATCCAATCAAGAGGGGAAAATTTGTGGACTTAGTGACGTCCCATGCAAAGAGCTTACCTTTACTTTGAAGAAAAGGGACGGGGATGGTACCGAAGAAATGACTGTTTTGGATTATTTTGTTAATGTCCGTAAGATAGATCTGCGCTACTCTGCTGATCTGCCATGCATTAATATTGGCAGGCCTAAACGGCCAACATATATACCCATCGAGCTGTGTGAATTGGTGTCATTGCAAAGATATACAAAAGCTCTTTCCACACTTCAAAGGGCTTCATTAGTGGAGAAGTCCAGACAGAAGCCACAAGAGAGGATGAGAATTTTATCAGATGCACTTAAAACCAGCAACTATGGTGCTGAACCTCTGCTTCAAAGTTGTGGAATTACTATAAGCACAGGCTTTACTCAAGTGGAAGGACGCGTTTTGCCTGCTCCAAGGTTGAAATTTGGCAATGGTGAAGATTTCAATCCCAGAAATGGAAGGTGGAATTTTAACAATAAGAAATTTGTGCAGCCAACAAAGATAGAGAAATGGGCTGTGGCAAACTTTTCTGCACGGTGCGATGTACGGGGACTTGTAAAGGATCTAATTAGAATTGGAAATACGAAAGGAATTATGATTGACCAACCATTTGACGTGTTTGAAGAAAATCCCCAGTTTAGACGCGCCCCGCCAATGGTTAGAGTGGAGAAGATGTTTGAGATCATTCAGTCTAAACTTCCCGGGGCTCCTCAATTCCTTCTCTGTTTGCTTCCTGATCGAAAAAACTGTGATATTTATGGTCCATGGAAAAAGAAGAATCTTGCTGATTATGGAATCGTCAATCAGTGCATGTGTCCTGTAAGAGTCAATGATCAGTATCTGGGTAATATAATGTTGAAGATCAATGCCAAGCTTGGTGGGCTGAACTCATTGTTGGGTGTTGAAAGTTCTCCGTCTCTTCCTATTGTTTCCAAAGCACCTACTCTCATTCTAGGAATGGATGTATCACATGGCTCACCAGGGCAGACTGATATTCCTTCAATTGCTGCTGTTGTCAGCTCTAGACAATGGCCTCTGATATCCAAATATAGGGCATGTGTTCGCACACAATCTGCAAAAGTTGAAATGATAGATAATTTGTTCAAGAAAGTATCAGATACTGAAGATGAGGGCATCATAAGGGAACTCTTGCTCGATTTCTATAATAGTTCTGGGAAGAGAAAACCGGATAACATTATTATTTTTAGGGACGGTGTTAGCGAGTCACAATTCAATCAAGTCTTGAATATCGAACTTGACCAGATCATTGAGGCGTGCAAGTTTCTTGATGAAAATTGGAATCCAAAATTTGCGGTAATTGTTGCTCAAAAGAACCATCACACAAGATTCTTCCAGCCCAACGCCCCTGAAAATGTCCCACCAGGTACTGTTATTGACAATAAAATTTGTCATCCCAGAAACTATGATTTCTACCTCTGTGCTCATGCGGGAATGATTGGCACAAGTAGGCCTACTCATTACCATGTGCTGCTTGATGAGATTGGCTTCTCCCCTGATGAACTTCAGGAGCTTGTTCATTCTCTTTCATATGTTTACCAAAGGAGCACTACTGCTATTTCAGTTGTTGCACCTATATGCTATGCACACTTAGCTGCAACTCAGTTGGGGCAATTCATGAAATTCGAGGATAAATCTGAGACATCCTCAAGCCATGGTGGGCTGAGTGCTGCAGGAGCTGTACCTGTCCCTCAGCTTCCAAAACTGCAGGAAAATGTGTGCAACTCCATGTTCTTCTGTTGA 2745 0.4259 MDSADGNGNGNGHEESLPPPPPVVPSDLVPLKVEEVPSAPPEPVKKKITRLPIARCGLGSKGMKIPLLTNHFNVNIGKNDGYFFQYSVSFTYEDGRPVEGKGVGRKIMDRVQETYASDLNGKEFAYDGEKSLFTIGSLPQNKLEFEIVLEEARSNRNNGNLSPDGNADNESDKKRVRRPFNSKAFKVEISFATKVPMYAIANALRGQETENFQEAVRVLDIILRQHAAKQGCLLVRQNFFHNDPKSFADVGGGVLGCRGFHSSFRATQSGLSLNIDVTTTMIIQPGPVVDFLISNQNARDPFQLDWAKAKRTLKNLRVKTHPSNQEGKICGLSDVPCKELTFTLKKRDGDGTEEMTVLDYFVNVRKIDLRYSADLPCINIGRPKRPTYIPIELCELVSLQRYTKALSTLQRASLVEKSRQKPQERMRILSDALKTSNYGAEPLLQSCGITISTGFTQVEGRVLPAPRLKFGNGEDFNPRNGRWNFNNKKFVQPTKIEKWAVANFSARCDVRGLVKDLIRIGNTKGIMIDQPFDVFEENPQFRRAPPMVRVEKMFEIIQSKLPGAPQFLLCLLPDRKNCDIYGPWKKKNLADYGIVNQCMCPVRVNDQYLGNIMLKINAKLGGLNSLLGVESSPSLPIVSKAPTLILGMDVSHGSPGQTDIPSIAAVVSSRQWPLISKYRACVRTQSAKVEMIDNLFKKVSDTEDEGIIRELLLDFYNSSGKRKPDNIIIFRDGVSESQFNQVLNIELDQIIEACKFLDENWNPKFAVIVAQKNHHTRFFQPNAPENVPPGTVIDNKICHPRNYDFYLCAHAGMIGTSRPTHYHVLLDEIGFSPDELQELVHSLSYVYQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSETSSSHGGLSAAGAVPVPQLPKLQENVCNSMFFC* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2567 914 Pfam Mid domain of argonaute 477 530 IPR032473 -
Psa5g2567 914 ProSiteProfiles Piwi domain profile. 567 875 IPR003165 GO:0003676
Psa5g2567 914 Pfam PAZ domain 289 414 IPR003100 GO:0005515
Psa5g2567 914 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 4 913 - -
Psa5g2567 914 Gene3D - 462 628 - -
Psa5g2567 914 Pfam Piwi domain 568 875 IPR003165 GO:0003676
Psa5g2567 914 CDD PAZ_argonaute_like 285 397 - -
Psa5g2567 914 SUPERFAMILY Ribonuclease H-like 551 873 IPR012337 -
Psa5g2567 914 MobiDBLite consensus disorder prediction 156 175 - -
Psa5g2567 914 Pfam N-terminal domain of argonaute 64 223 IPR032474 -
Psa5g2567 914 ProSiteProfiles PAZ domain profile. 328 398 IPR003100 GO:0005515
Psa5g2567 914 SMART DUF1785_2 233 285 IPR014811 -
Psa5g2567 914 Pfam Argonaute linker 1 domain 235 283 IPR014811 -
Psa5g2567 914 Gene3D paz domain 279 402 - -
Psa5g2567 914 SUPERFAMILY PAZ domain 280 438 IPR036085 GO:0005515
Psa5g2567 914 SMART Piwi_a_2 567 875 IPR003165 GO:0003676
Psa5g2567 914 CDD Piwi_ago-like 442 869 IPR045246 -
Psa5g2567 914 Gene3D - 634 914 IPR036397 GO:0003676
Psa5g2567 914 MobiDBLite consensus disorder prediction 1 27 - -
Psa5g2567 914 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 4 913 - -
Psa5g2567 914 Pfam Argonaute linker 2 domain 424 470 IPR032472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2567 Psa-Chr5 197702323 197710482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2567 19 914 Eukaryotic Initiation Factors Gene Family AT1G48410 35.263 1.41e-168 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2567 K11593 - gmx:100820376 1588.93