Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2539 ATGTATGAAATGAGATATCTTAAGTTCTATTATGGGAAGTGGAATGAGACAAGTAATATATATCTTCCCAACGGTCTGGATTCATTGTCTGACAAATTGAGGTACCTTGAATGGCATAGATACTGTCTGAAGTCTTTGCCATCGAAATTTAGTGCAAGTTTGCTTGTAGAGCTTTGCATGCCTTTCAGCAAACTTCAAAAGCTTTGGGATGGAGTTCAGGATCTTGCGAATTTGAAGGAAATTGACCTTCGATTCTGCAAAGAGTTGGTTGAGGTTCCAGACTTGTCTAAGGCTAGGAATTTGGAATGGTTATCACTTTCTCAGTGTAGAAATTTGCGTGAAATCCATCCCTCCATTTTGTCACTCGACAATCTTAAAGATCTCGAATTAGAAGGTTGTACAAAGATTGAAAGCCTAATTCAAATGGACAACAACCATTTAGAATCTCTCCAAAACATCCAACTTAGCAATTGCTCATTATTGAAAGAGTTTTCAATCACTTCAAACAATCTCGAAAATTTGTTGTTAGATGGTACTTCTATCCAAGAACTGTCATCGTCGATTTGGTGCTGCGAGAAACTGAAGATGGTTGATCTACACAACTGTGATAATCTTGTGGGTTTTGGGGAAAATATTAAAAACTATATGGGAATTGGATCTCTTAATACTATAGTCCTTTCAGGGTGCAAAGGACTGAATGCATCAAATCTCGGTTTCAACCTCAAATCATGGCAAGCAACTTTAACATCACTGAATTTGGAAAATTGTTGCAACTTAGAGACACTCCCTGATAGCATTGGTTTATTATCATCGCTACAATGCTTAAAACTAAGCGGAAGCAATGTTGAGTGTCTGTCACCAAACATCAAAAGCCTTAACAACCTTAAAGAGCTAAGGTTAGACAACTGCAAGAAACTAGTGTCTGTCCCGGAGCTTCCTTCGTCGCTGCGATTATTTAGTGCTATCAACTGCATTTCTCTAATCACAGACCTTACTACATTGGACATAGCCTTTGAGCATCGACCTAAACCTCAACCGTATCCTCAGTCAGTGTTGTTTCCTGGATCTCATGTTCCTAAGAGATTTAGCTATCAACATCATCACAATGGTTCAGCTTCTGAAGTAACTATTAAGTATCTTCCAGAATCTGGTTTATATGGTTTAGTTTTTTGTCTTGTTCTTTCAGTGTCAAATGATAAGTATGGAATGGTTCAATTTTCTGTTAACCAAAATTCCAAAAAGATAGGTGGAAAAGCTACCTCATTGCGTAATCTGCATTTGGTTATGGATCATGTGTTTCTTTGGTATTTTGACGTTAAGACTGGTGCTAAACACATTTCTTTGCATAGCCAAATAGAAGAAAGTGGAGCATGGGATAACCCTTATGATATATCATTTCAATTTTCACTTGAAAATGAGGAGGGAGAATGGTCAACAAAGAGGATAAAAGGGTGTGGGATCTTCCCACTTTATCACTTACAAGAAGAACCCAACAACCATAAAGAATCTTTGGAGACTAACAATTTGCACCTCGAGCCTAAACCCGAACTAGAGCTAGATTCTTGCGATCTAATTTCCGAGCTAGAAAGTTTGTTATGTGATAGTTATATGTTTTCTCCCATGTGCACTGACTCAACAGCTCTTTCAATACTTCTTGAAAATTTAGAGACCCTTTTGGAGACACCACTTGAAATTCTCTCTTCAGATAATGAAGTGAAGCAAAAGTTCTATCAAATTTTGGAGCAACTTGGCCAGTTTGAAAACCAAATTCCTGTTAAGCTTCATCATGTTATTTGCAAGCTAAGAACTTTCATTGAAGGGGTTGATGTAAGATTTGTGAGTGCTCAGAAAACTATCCAAGATTATAATCTTCTGCTTCAATCAAGGACTGATATATCAAAGCAATTGGTAAGCGTCAAAGCCCGAGAATACGAAAATAAATCTGAAATCTCTCGTGGTAAAATAGAATTTGAAAGAATCAATTCTGAGATTGTTGAATTAGAACAAAAATTAAGTGGTCTTGTTGTGATTAGAGACAAGTTGAAGAGAGAATTGGAGCATTGTGATGTGATAGATAAAAACCTTAAGACAGAAGTTGCACAGTGCAAGAATGTCTTAATAAATTTGAAAAAGTCTGAGGTTTCTTACAAAGAGGCCTTAACTAATAAGAAGAAAGTTGAAGATGAATGGACTGATTTGAAAAAGAATTATGCTACCAATAAGATTTGA 2229 0.3661 MYEMRYLKFYYGKWNETSNIYLPNGLDSLSDKLRYLEWHRYCLKSLPSKFSASLLVELCMPFSKLQKLWDGVQDLANLKEIDLRFCKELVEVPDLSKARNLEWLSLSQCRNLREIHPSILSLDNLKDLELEGCTKIESLIQMDNNHLESLQNIQLSNCSLLKEFSITSNNLENLLLDGTSIQELSSSIWCCEKLKMVDLHNCDNLVGFGENIKNYMGIGSLNTIVLSGCKGLNASNLGFNLKSWQATLTSLNLENCCNLETLPDSIGLLSSLQCLKLSGSNVECLSPNIKSLNNLKELRLDNCKKLVSVPELPSSLRLFSAINCISLITDLTTLDIAFEHRPKPQPYPQSVLFPGSHVPKRFSYQHHHNGSASEVTIKYLPESGLYGLVFCLVLSVSNDKYGMVQFSVNQNSKKIGGKATSLRNLHLVMDHVFLWYFDVKTGAKHISLHSQIEESGAWDNPYDISFQFSLENEEGEWSTKRIKGCGIFPLYHLQEEPNNHKESLETNNLHLEPKPELELDSCDLISELESLLCDSYMFSPMCTDSTALSILLENLETLLETPLEILSSDNEVKQKFYQILEQLGQFENQIPVKLHHVICKLRTFIEGVDVRFVSAQKTIQDYNLLLQSRTDISKQLVSVKAREYENKSEISRGKIEFERINSEIVELEQKLSGLVVIRDKLKRELEHCDVIDKNLKTEVAQCKNVLINLKKSEVSYKEALTNKKKVEDEWTDLKKNYATNKI* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2539 742 Pfam Leucine Rich Repeat 55 73 IPR011713 -
Psa5g2539 742 SUPERFAMILY L domain-like 6 325 - -
Psa5g2539 742 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 495 IPR044974 GO:0006952
Psa5g2539 742 Coils Coil 650 684 - -
Psa5g2539 742 Gene3D Ribonuclease Inhibitor 3 167 IPR032675 -
Psa5g2539 742 Gene3D Ribonuclease Inhibitor 168 341 IPR032675 -
Psa5g2539 742 Coils Coil 709 736 - -
Psa5g2539 742 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2539 Psa-Chr5 192831413 192834505 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2539 1 298 WRKY Transcription Factor Family AT4G12020 34.967 2.52e-31 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2539 - - gsj:114410062 530.02