Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2535 ATGGATTCTGAAACTGTTGATGTTGGTGTTGTGGAGAAAGATCCTACTTTGCGTTACGCACGGTATGATGAAAAGTTAGGGAAAGGAGCGTTTAAGACTGTGTATAAAGCTTTTGATGAAGTAGATGGAATAGAAGTTGCTTGGAACCGAATTACTATAGAGGATGTTATGCAATTACCTGAAAATTTGGAAAAGTTGTATTCTGAGGTTCACCTTCTTAAGTCACTGAAACATGAAAATATTATTAAGTTGTATAGCTCTTGGGTGGATGAAAAGACCAGGACTATTAACATGATAACTGAATTGTTCACCTCTGGGAGTTTGAGGCAGTATCGGCGAAAACATAAGAATGTGGATATGAAAGCTATCAAGAACTGGGCGAGGCAGATTCTTCGTGGCTTGTGCTTTCTGCACAGTCACAATCCTCCTGTTATTCACAGGGATCTTAAATGCGATAACATTTTTGTTAACGGGAACAATGGGCAAGTTAAGATTGGAGATCTCGGTCTGGCGATTATCATGCAGCAGCCTACTGCCCGGAGTGTTATTGGTACTCCAGAATTCATGGCTCCGGAGCTTTATGAGGAAGAATACAATGAACTTGTTGACATATATTCCTTTGGCATGTGTATCTTGGAAATGATCACCTGTGAGTACCCGTATAGTGAATGCAAAAATCCGGCGCAGATATATAAGAAAGTTACCTCTGGTATAAAGCCTGCTGCTCTTGCTAAAGTGAATGATCCTGAAGTGAAGCAATTTATAGAAAAGTGTTTAGTTCCAGCATCTATGAGATTGCCTGCATCTGAATTGCTGAAAGACCCATTCCTCGCAACTGGAAACACAAAGATCTCTCATGATACCCCGCCGCTGCTTAAGCCCCCCATCAAATCAATGAATCCACCAGCATGTGAGCCCCATCCCATGGAGATAGATTCAAACCTCGGGCATACATCACCTGGCTCCTCTGTGGAAAGGATTAAAGAAACTTCTCAAGTTTCAATTCTTGATCTCCTGAGGAAGACAGAGAACAATGAGTTTAGGTTAAGAGGGGAGAAGAATGCCGATCTTACAATTTCACTTACACTGCGAATTGCCGATTCTCATGGTGGAGCTAGGAATATCCATTTTCCATTCTATATTGATTCCGACACCACAATTTCAATTGCCGAGGAAATGGTGGAACATCTGGAACTCAAGGCTGAAGATGTAGCTGTCATTGCTGAGCTTATAAACAACATGATTTTTGAGCTTGTGCCTGACTGGAAACCCTTATGTGAGAACCTCTCATCTGGAACAGATGATTTGTACATGCCTTCGGAAACTCAGAATGGTGAACAGTTAAACTGCCATTGGACATTGGGATCAGATAGTTTTGATTTGAAGGCAATGTATGAGGATTTAGGTCAGTCACACCTTGATGGGGAAGATCAGGACAAGCAAGAATCTGTTTCATCAGATATTTCAGCCGAGTATGGTGTTGCAATTGCCACTGATTCTGAAGGTGTAGAGCCTGATTGTTTTATTCTTCATGAATGTTGTAAGGGATCCAATGGCTTAAATTCCAATTCAGATGTCAGGATTTATGGTCAAGAAGATGGAAACAATAATCTATCAGAGAACTCAGTCTCAAGTTACATGTCTAGCAAATGTTCTCTTGACAATGATCATTTAAATGAGCTACAGTTGGAGCTTGAAGCAATAGAAACCCAGTATCGGCAATGTTTTCGTGAACTTGTGAAGATGAGGGAGGAAGCCATAGAAAATGCCAAAAAGAGATGGATTTCAAAGAAGAATACAACAGTTATATGA 1812 0.4067 MDSETVDVGVVEKDPTLRYARYDEKLGKGAFKTVYKAFDEVDGIEVAWNRITIEDVMQLPENLEKLYSEVHLLKSLKHENIIKLYSSWVDEKTRTINMITELFTSGSLRQYRRKHKNVDMKAIKNWARQILRGLCFLHSHNPPVIHRDLKCDNIFVNGNNGQVKIGDLGLAIIMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMITCEYPYSECKNPAQIYKKVTSGIKPAALAKVNDPEVKQFIEKCLVPASMRLPASELLKDPFLATGNTKISHDTPPLLKPPIKSMNPPACEPHPMEIDSNLGHTSPGSSVERIKETSQVSILDLLRKTENNEFRLRGEKNADLTISLTLRIADSHGGARNIHFPFYIDSDTTISIAEEMVEHLELKAEDVAVIAELINNMIFELVPDWKPLCENLSSGTDDLYMPSETQNGEQLNCHWTLGSDSFDLKAMYEDLGQSHLDGEDQDKQESVSSDISAEYGVAIATDSEGVEPDCFILHECCKGSNGLNSNSDVRIYGQEDGNNNLSENSVSSYMSSKCSLDNDHLNELQLELEAIETQYRQCFRELVKMREEAIENAKKRWISKKNTTVI* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2535 603 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 359 415 IPR024678 GO:0004674|GO:0005524
Psa5g2535 603 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 598 - -
Psa5g2535 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Psa5g2535 603 Gene3D Transferase(Phosphotransferase) domain 1 103 284 - -
Psa5g2535 603 PANTHER WNK KINASE 1 598 - -
Psa5g2535 603 Gene3D - 357 446 - -
Psa5g2535 603 Gene3D Phosphorylase Kinase; domain 1 4 101 - -
Psa5g2535 603 Coils Coil 558 585 - -
Psa5g2535 603 SMART serkin_6 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2535 603 ProSiteProfiles Protein kinase domain profile. 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2535 603 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2535 603 SUPERFAMILY Protein kinase-like (PK-like) 23 320 IPR011009 -
Psa5g2535 603 CDD STKc_WNK 18 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2535 Psa-Chr5 192702001 192706004 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2535 11 602 MAP Kinase Kinase Kinase AT5G41990 53.156 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Psa5g2535 Pkinase 4.8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2535 K08867 - gmx:100783717 862.062